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Marine microbiology

2013

Medina-Sánchez, JM, Delgado-Molina, JA, Bratbak, G, Bullejos, FJ, Villar-Argaiz, M, & Carrillo, P (2013). Maximum in the middle: Nonlinear response of microbial plankton to ultraviolet radiation and phosphorus. PLoS ONE 8(4): e60223. doi:10.1371/journal.pone.0060223

Ssebiyonga, N; Erga, SR; Hamre, B; Stamnes, JJ; Frette, O (2913) Light conditions and photosynthetic efficiency of phytoplankton in Murchison Bay, Lake Victoria, Uganda. Limnologica 43:185-193. doi:10.1016/j.limno.2012.09.005

Carreira, C, Heldal M, & Bratbak G (2013). Effect of increased pCO(2) on phytoplankton-virus interactions. Biogeochemistry 114(1-3): 391-397.

Steenbergh, AK, Bodelier PLE, Heldal M, Slomp CP, & Laanbroek HJ (2013). Does microbial stoichiometry modulate eutrophication of aquatic ecosystems? Environmental Microbiology 15(5): 1572-1579.

Grob, C, Ostrowski M, Holland RJ, Heldal M, Norland S, Erichsen ES, Blindauer C, Martin AP, Zubkov MV & Scanlan DJ (2013). Elemental composition of natural populations of key microbial groups in Atlantic waters. Environmental Microbiology, 15: 3054–3064. doi:10.1111/1462-2920.12145

Lanzén A, Simachew A, Gessesse A, Chmolowska D, Jonassen I, et al. (2013) Surprising Prokaryotic and Eukaryotic Diversity, Community Structure and Biogeography of Ethiopian Soda Lakes. PLoS ONE 8(8): e72577. doi:10.1371/journal.pone.0072577

Dornelas, M, Magurran AE, Buckland ST, Chao A, Chazdon RL, Colwell RK, Curtis T, Gaston KJ, Gotelli NJ, Kosnik MA, McGill B, McCune JL, Morlon H, Mumby PJ, Øvreås L, Studeny A, & Vellend M (2013). Quantifying temporal change in biodiversity: challenges and opportunities. Proceedings of the Royal Society B-Biological Sciences 280(1750).

Lanzen, A; Simachew, A; Gessesse, A; Chmolowska, D; Jonassen, I; Øvreås, L (2013) Surprising Prokaryotic and Eukaryotic Diversity, Community Structure and Biogeography of Ethiopian Soda Lakes. PLoS One 8 doi:10.1371/journal.pone.0072577

Eme, L; Reigstad, LJ; Spang, A; Lanzen, A; Weinmaier, T; Rattei, T; Schleper, C; Brochier-Armanet, C (2013) Metagenomics of Kamchatkan hot spring filaments reveal two new major (hyper)thermophilic lineages related to Thaumarchaeota. Res. Microbiol. 164:425-438 doi:10.1016/j.resmic.2013.02.006

Urich, T, Lanzén A, Stokke R, Bayer C, Pedersen RB, Thorseth I, Schleper C, Steen IH, Øvreas L (2013) Microbial community structure and functioning in marine sediments associated with diffuse hydrothermal venting assessed by integrated meta-omics. Environmental Microbiology. Accepted for publication. doi:10.1111/1462-2920.12283

Yadetie, F; Karlsen, OA; Lanzen, A; Berg, K; Olsvik, P; Hogstrand, C; Goksoyr, A "Global transcriptome analysis of Atlantic cod (Gadus morhua) liver after in vivo methylmercury exposure suggests effects on energy metabolism pathways" Aquat. Toxicol. 126:314-325 doi:10.1016/j.aquatox.2012.09.013

White, DA, Pagarette, A, Rooks, P, Ali, ST (2013). The effect of sodium bicarbonate supplementation on growth and biochemical composition of marine microalgae culturs. J. Appl. Phycol. 25:153-165 doi:10.1007/s10811-012-9849-6

Pagarete, A, Lanzen A, Puntervoll P, Sandaa R-A, Larsen A, Larsen JB, Allen MJ & Bratbak G (2013). Genomic Sequence and Analysis of EhV-99B1, a New Coccolithovirus from the Norwegian Fjords. Intervirology 56(1): 60-66.

Pagarete, A, Chow CE, Johanessen T, Fuhrman JA, Thingstad TF, Sandaa R-A (2013) Strong seasonality and inter-annual recurrence in myovirus communities. Appl. Environ. Microbiol. 79:6253-6259 doi:10.1128/AEM.01075-13

Read BA, Kegel J, Klute MJ, Kuo A, Lefebvre SC, Maumus F, Mayer C, Miller J, Monier A, Salamov A, Young J, Aguilar M, Claverie JM, Frickenhaus S, Gonzalez K,  Herman EK, Lin YC, Napier J, Ogata H, Sarno AF, Shmutz J, Schroeder D, de Vargas  C, Verret F, von Dassow P, Valentin K, Van de Peer Y, Wheeler G; Emiliania huxleyi Annotation Consortium, Dacks JB, Delwiche CF, Dyhrman ST, Glöckner G, John U, Richards T, Worden AZ, Zhang X, Grigoriev (2013) Pan genome of the phytoplankton Emiliania underpins its global distribution. Nature 499(7457):209-13. doi:10.1038/nature12221.

Paulino, AI; Heldal, M; Norland, S; Egge, JK (2013) Elemental stoichiometry of marine particulate matter measured by wavelength dispersive X-ray fluorescence (WDXRF) spectroscopy. J. Mar. Biol. Assoc. UK 93:2003-2014. doi:10.1017/s0025315413000635

Babazadeh R, Adiels CB, Smedh M, Petelenz-Kurdziel E, Goksor M, Hohmann S (2013). Osmostress-induced cell volume loss delays yeast Hog1 signaling by limiting diffusion processes and by Hog1-specific effects. PLoS One 8(11): e80901. doi:10.1371/journal.pone.0080901

Geijer, C, Medrala-Klein D, Petelenz-Kurdziel E, Ericsson A, Smedh M et al. (2013) Initiation of the transcriptional response to hyperosmotic shock correlates with the potential for volume recovery FEBS Journal 280(16):3854-67 doi:10.1111/febs.12382

Petelenz-Kurdziel, E, Kuehn C, Nordlander B, Klein D, Hong, et al. (2013) Quantitative Analysis of Glycerol Accumulation, Glycolysis and Growth under Hyper Osmotic Stress PLoS Computational Biology 9(6):e1003084, doi:10.1371/journal.pcbi.1003084

Andersson, A, Jurgensone I, Rowe OF, Simonelli P, Bignert A, et al. (2013) Can Humic Water Discharge Counteract Eutrophication in Coastal Waters? PLoS ONE 8(4): e61293. doi:10.1371/journal.pone.0061293

Storesund E, J, Øvreås L (2013) Diversity of Planctomycetes in iron-hydroxide deposits from the Arctic Mid Ocean Ridge (AMOR) and description of Bythopirellula goksoyri gen. nov., sp. nov., a novel Planctomycete from deep sea iron-hydroxide deposits. Antonie von Leeuwenhoek doi:10.1007/s10482-013-0019-x

Lignell, R, Haario H, Laine M, & Thingstad TF (2013). Getting the "right" parameter values for models of the pelagic microbial food web. Limnology and Oceanography 58(1): 301-313.

C. M. Moore, CM, Mills MM, Arrigo KR, Berman-Frank I, Bopp L, Boyd PW, Galbraith ED, Geider RJ, Guieu C, Jaccard SL, Jickells TD, La Roche J, Lenton TM, Mahowald NM, Marañón E, Marinov I, Moore JK, Nakatsuka T, Oschlies A, Saito MA, Thingstad TF, Tsuda A & Ulloa O(2013) Processes and patterns of oceanic nutrient limitation. Nature Geoscience 6:701-710 doi:10.1038/NGEO1765

Riebesell, U, Gattuso JP, Thingstad TF, Middelburg JJ (2013) Arctic ocean acidification: pelagic ecosystem and biogeochemical responses during a mesocosm study. Preface. Biogeosciences 10:5619-5626. doi:10.5194/bg-10-5619-2013

Santl-Temkiv, T; Finster, K; Dittmar, T; Hansen, BM; Thyrhaug, R; Nielsen, NW; Karlson, UG (2913) Hailstones: A Window into the Microbial and Chemical Inventory of a Storm Cloud. PLoS One 8: doi:10.1371/journal.pone.0053550

Töpper, B, Thingstad TF, Sandaa RA (2013). Effects of differences in organic supply on bacterial diversity subject to viral lysis. Fems Microbiol Ecol 83:202-213.

Castellani, M, Våge S, Strand E, Thingstad TF & Giske, J. (2013) "The Scaled Subspaces Method: A new trait-based approach to model communities of populations with largely inhomogeneous density." Ecol. Model. 251:173-186, doi:10.1016/j.ecolmodel.2012.12.006.

Våge, S, Storesund E J & Thingstad TF (2013) Adding a cost of resistance description extends the ability of virushost model to explain observed patterns in structure and function of pelagic microbial communities. Environ. Microbiol. 15(6):1842-1852, doi:10.1111/1462-2920.12077.

Våge, S, Storesund E J & Thingstad TF (2013) SAR11 viruses and defensive host strains. Nature 499:E3-E4, doi:10.1038/nature12387

Våge, S, Castellani, M, Thingstad TF & Giske, J. (2013) Successful strategies in size structured mixotrophic food webs. Aquat. Ecol. 47(3)329-347. doi:10.1007/s10452-013-9447-y