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PeptideShaker

PeptideShaker is a search engine independent platform for interpretation of proteomics identification results from multiple search engines

http://compomics.github.io/projects/peptide-shaker.html

SearchGUI

SearchGUI is a user-friendly open-source graphical user interface for configuring and running proteomics identification search engines and de novo sequencing algorithms.

http://compomics.github.io/projects/searchgui.html

Academic article
  • Show author(s) (2021). PeptideShaker Online: A User-Friendly Web-Based Framework for the Identification of Mass Spectrometry-Based Proteomics Data. Journal of Proteome Research. 5419-5423.
  • Show author(s) (2019). PathwayMatcher: proteoform-centric network construction enables fine-granularity multi-omics pathway mapping. GigaScience. 1-13.

More information in national current research information system (CRIStin)

46250199

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