- E-mailCarlos.Horro@uib.no
- Visitor AddressHIB - Thormøhlens gate 555006 Bergen
- Postal AddressPostboks 78035020 Bergen
PeptideShaker
PeptideShaker is a search engine independent platform for interpretation of proteomics identification results from multiple search engines
http://compomics.github.io/projects/peptide-shaker.html
SearchGUI
SearchGUI is a user-friendly open-source graphical user interface for configuring and running proteomics identification search engines and de novo sequencing algorithms.
Academic article
- (2021). PeptideShaker Online: A User-Friendly Web-Based Framework for the Identification of Mass Spectrometry-Based Proteomics Data. Journal of Proteome Research. 5419-5423.
- (2019). PathwayMatcher: proteoform-centric network construction enables fine-granularity multi-omics pathway mapping. GigaScience. 1-13.
Academic literature review
- (2023). A Galaxy of informatics resources for MS-based proteomics. Expert Review of Proteomics. 251-266.
More information in national current research information system (CRIStin)
Contributing to PeptideShaker (http://compomics.github.io/projects/peptide-shaker.html), SearchGUI (http://compomics.github.io/projects/searchgui.html) and their integration into Galaxy (https://galaxyproject.org/).
46250199
Fields of competence