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Irene Roalkvam

Researcher
Stiftelsen industrilaboratorium
  • E-mailIrene.Roalkvam@ilab.no
  • Phone+47 55 58 46 28
  • Visitor Address
    HiB
    Thormøhlensgate 55
    5008 Bergen
    Room 
    434A1
  • Postal Address
    Postboks 7800
    5020 Bergen

Fish farms are important contributions to sustainable food production, and new technologies have made it possible to cultivate salmon and lump fish in closed fish farms on shore. The biggest challenge is to keep the fish healthy in order to have a normal developement and weight gain. In this project I will study the biofilm formation in tanks, tubes and filters in 3 of these fish farms. The biofilms can give a poorer water quality and also host fish pathogenic bacteria that could effect the fish in a negative manner. One of the main goals in this project is to develop tools for monitoring changes in the biofilm community or increased abundance of fish pathogens so that operational precaustions can be made in order to avoid disease outbrakes.

Furthermore, a well-studied fish pathogenic bacterium called Tenacibaculum has been chosen as a model organism for studies on infections from bacteria in the close environment. Increased knowledge on virulence and quorum sensing mechanisms in this bacterium is important because it can tell us how an environmental microbe can become a fish pathogen in certain cases, and also unvail clues to how Tenacibaculum infections can be limited or prevented in the future.

Academic article
  • Le Moine Bauer, Sven; Sjøberg, Andreas Gilje; L´Haridon, Stephane; Stokke, Runar; Roalkvam, Irene; Steen, Ida Helene; Dahle, Håkon. 2019. Profundibacter amoris gen. nov., sp. nov., a new member of the Roseobacter clade isolated from Loki's Castle Vent Field on the Arctic Mid-Ocean Ridge. International Journal of Systematic and Evolutionary Microbiology. 975-981.
  • Roalkvam, Irene; Drønen, Karine; Dahle, Håkon; Wergeland, Heidrun Inger. 2019. Microbial Communities in a Flow-Through Fish Farm for Lumpfish (Cyclopterus lumpus L.) During Healthy Rearing Conditions. Frontiers in Microbiology.
  • Roalkvam, Irene; Drønen, Karine; Dahle, Håkon; Wergeland, Heidrun Inger. 2019. Comparison of active biofilm carriers and commercially available inoculum for activation of biofilters in marine recirculating aquaculture systems (RAS). Aquaculture.
  • Schouw, Anders; Vulcano, Francesca; Roalkvam, Irene; Hocking, William Peter; Reeves, Eoghan; Stokke, Runar; Bødtker, Gunhild; Steen, Ida Helene. 2018. Genome analysis of Vallitalea guaymasensis strain L81 isolated from a deep-sea hydrothermal vent system. Microorganisms.
  • Steen, Ida Helene; Dahle, Håkon; Stokke, Runar; Roalkvam, Irene; Daae, Frida Lise; Rapp, Hans Tore; Pedersen, Rolf B.; Thorseth, Ingunn Hindenes. 2016. Novel barite chimneys at the Loki´s Castle vent field shed light on key factors shaping microbial communities and functions in hydrothermal systems. Frontiers in Microbiology.
  • Le Moine Bauer, Sven; Roalkvam, Irene; Steen, Ida Helene; Dahle, Håkon. 2016. Lutibacter profundi sp. nov., isolated from a deep-sea hydrothermal system on the Arctic Mid-Ocean Ridge and emended description of the genus Lutibacter. International Journal of Systematic and Evolutionary Microbiology. 2671-2677.
  • Roalkvam, Irene; Drønen, Karine; Stokke, Runar; Daae, Frida Lise; Dahle, Håkon; Steen, Ida Helene. 2015. Physiological and genomic characterization of Arcobacter anaerophilus IR-1 reveals new metabolic features in Epsilonproteobacteria. Frontiers in Microbiology.
  • Roalkvam, Irene; Bredy, Florian; Baumberger, Tamara; Pedersen, Rolf B.; Steen, Ida Helene. 2015. Hypnocyclicus thermotrophus gen. Nov., sp. nov. isolated from a microbial mat in a hydrothermal vent field. International Journal of Systematic and Evolutionary Microbiology. 4521-4525.
  • Stokke, Runar; Dahle, Håkon; Roalkvam, Irene; Wissuwa, Juliane; Daae, Frida Lise; Tooming-Klunderud, Ave; Thorseth, Ingunn Hindenes; Pedersen, Rolf B.; Steen, Ida Helene. 2015. Functional interactions among filamentous Epsilonproteobacteria and Bacteroidetes in a deep-sea hydrothermal vent biofilm. Environmental Microbiology. 4063-4077.
  • Hocking, William Peter; Roalkvam, Irene; Magnussen, Carina ; Stokke, Runar; Steen, Ida Helene. 2015. Assessment of the carbon monoxide metabolism of the hyperthermophilic sulfate-reducing archaeon Archaeoglobus fulgidus VC-16 by comparative transcriptome analyses. Archaea. 12 pages.
  • Drønen, Karine; Roalkvam, Irene; Beeder, Janiche; Torsvik, Terje; Steen, Ida Helene; Skauge, Arne; Liengen, Turid. 2014. Modeling of heavy nitrate corrosion in anaerobe aquifer injection water biofilm: A case study in a flow rig. Environmental Science and Technology. 8627-8635.
  • Hocking, William Peter; Stokke, Runar; Roalkvam, Irene; Steen, Ida Helene. 2014. Identification of key components in the energy metabolism of Archaeoglobus fulgidus by transcriptome analyses. Frontiers in Microbiology.
  • Dahle, Håkon; Roalkvam, Irene; Pedersen, Rolf B.; Thorseth, Ingunn Hindenes; Steen, Ida Helene. 2013. The versatile in situ gene expression of an Epsilonproteobacteria-dominated biofilm from a hydrothermal chimney. Environmental Microbiology Reports. 282-290.
  • Stokke, Runar; Roalkvam, Irene; Lanzén, Anders; Haflidason, Haflidi; Steen, Ida Helene. 2012. Integrated metagenomic and metaproteomic analyses of an ANME-1-dominated community in marine cold seep sediments. Environmental Microbiology. 1333-1346.
  • Roalkvam, Irene; Jørgensen, Steffen Leth; Chen, Yifeng; Stokke, Runar; Dahle, Håkon; Hocking, William Peter; Lanzén, Anders; Haflidason, Haflidi; Steen, Ida Helene. 2011. New insight into stratification of anaerobic methanotrophs in cold seep sediments. FEMS Microbiology Ecology. 233-243.
Lecture
  • Dahle, Håkon; Økland, Ingeborg Elisabet; Roalkvam, Irene; Thorseth, Ingunn Hindenes; Pedersen, Rolf B.; Steen, Ida Helene. 2014. Towards a framework for analyses of how energy landscapes shape microbial communities in deep-sea hydrothermal systems.
  • Stokke, Runar; Dahle, Håkon; Roalkvam, Irene; Daae, Frida Lise; Thorseth, Ingunn Hindenes; Pedersen, Rolf B.; Steen, Ida Helene. 2014. Metagenomic study of a filamentous microbial mat from the Loki´s Castle Vent Field.
  • Roalkvam, Irene. 2014. An Arcobacter strain with MIC potential isolated from injection water.
Popular scientific lecture
  • Roalkvam, Irene. 2018. Mikrobiell overvåkning av rognkjeksanlegg -prøvetaking og analyseverktøy.
  • Roalkvam, Irene. 2014. Mikrobielle Teknikker.
Academic lecture
  • Drønen, Karine; Roalkvam, Irene; Nilsen, Hanne Katrine; Olsen, A.B.; Olsen, Anne Berit; Dahle, Håkon; Wergeland, Heidrun Inger. 2018. Monitoring the main changes in the bacterial community in a RAS biofilter during the first year of operation.
  • Roalkvam, Irene; Drønen, Karine; Dahle, Håkon; Wergeland, Heidrun Inger. 2018. Mikrobiell overvåkning av rognkjeksanlegg ved omfattende prøvetaking og detaljert analyseverktøy.
  • Roalkvam, Irene; Drønen, Karine; Wergeland, Heidrun Inger; Dahle, Håkon. 2018. Mikrobiell overvåkning av rognkjeksanlegg -prøvetaking og analyseverktøy.
  • Roalkvam, Irene; Drønen, Karine; Stokke, Runar; Steen, Ida Helene. 2015. Isolation, characterization and genome analysis of a nitrate reducing Arcobacter sp. isolated from saline aquifer water.
  • Roalkvam, Irene. 2015. Isolation, characterization and genome analysis of a nitrate reducing Arcobacter sp.
  • Steen, Ida Helene; Dahle, Håkon; Roalkvam, Irene; Stokke, Runar; Thorseth, Ingunn Hindenes; Pedersen, Rolf B. 2014. Microbial communities associated with low-temperature venting barite chimneys in the Loki´s Castle black smoker field.
  • Steen, Ida Helene; Dahle, Håkon; Roalkvam, Irene; Stokke, Runar; Thorseth, Ingunn Hindenes; Pedersen, Rolf B. 2014. Microbial communities associated with low-temparture venting barite chimneys in the Loki´s Castle black smoker field.
  • Roalkvam, Irene; Stokke, Runar; Haflidason, Haflidi; Steen, Ida Helene. 2012. PROTEOGENOMICS OF A MARINE SEDIMENT COMMUNITY DOMINATED BY ANME-1.
  • Stokke, Runar; Roalkvam, Irene; Steen, Ida Helene. 2012. Exploring Metagenomes.
  • Thorseth, Ingunn Hindenes; Steen, Ida Helene; Roalkvam, Irene; Dahle, Håkon; Stokke, Runar; Rapp, Hans Tore; Pedersen, Rolf B. 2011. Microbial processes and biomineralisation associated with low-temperature venting and formation of barite chimneys at Loki's Castle hydrothermal field.
  • Thorseth, Ingunn Hindenes; Steen, Ida Helene; Roalkvam, Irene; Stokke, Runar; Rapp, Hans Tore; Pedersen, Rolf-Birger. 2010. Microbial life associated with low-temperature hydrothermal venting and formation of barite chimneys at Loki’s Castle vent field.
  • Dahle, Håkon; Roalkvam, Irene; Jørgensen, Steffen Leth; Stokke, Runar; Thorseth, Ingunn Hindenes; Pedersen, Rolf B.; Steen, Ida Helene. 2010. A variety of microbial mats cover the chimney walls of the Loki's Castle hydrothermal field.
Doctoral dissertation
  • Roalkvam, Irene. 2012. Diversity, stratification and in situ metabolism of anaerobic methanotrophic archaea in Nyegga cold seeps.
  • Roalkvam, Irene. 2012. Diversity, stratification and in situ metabolism of anaerobic methanotrophic archaea in Nyegga cold seeps.
Poster
  • Roalkvam, Irene; Drønen, Karine; Dahle, Håkon; Wergeland, Heidrun Inger. 2019. Microbial activation of biofilters in marine RAS -based on lab experiments and field observations.
  • Drønen, Karine; Roalkvam, Irene; Dahle, Håkon; Nilsen, Hanne Katrine; Olsen, Anne Berit; Wergeland, Heidrun Inger. 2019. Effect of UV water treatment on microbial community structure Studied in two different land based aquaculture systems.
  • Hocking, William Peter; Roalkvam, Irene; Stokke, Runar; Steen, Ida Helene. 2015. New insights into energy conservation mechanisms in the sulfate respiring archaeon Archaeoglobus fulgidus VC16.
  • Stokke, Runar; Roalkvam, Irene; Steen, Ida Helene. 2015. Metagenomics-based enzyme discovery.
  • Roalkvam, Irene; Stokke, Runar; Drønen, Karine; Steen, Ida Helene; Dahle, Håkon. 2015. Isolation, characterization and genome analysis of a nitrate reducing Arcobacter sp. isolated from injection water.
  • Drønen, Karine; Roalkvam, Irene; Beeder, Janiche; Torsvik, Terje; Steen, Ida Helene; Skauge, Arne; Liengen, Turid. 2015. Heavy nitrate corrosion in anarobe aquifer injection water biofilm: Process modeling.
  • Roalkvam, Irene; Drønen, Asbjørg Karine; Stokke, Runar; Steen, Ida Helene. 2014. Isolation, characterization and genome analysis of a nitrate reducing Arcobacter sp. isolated from saline aquifer water.
  • Steen, Ida Helene; Stokke, Runar; Wissuwa, Juliane; Steinsbu, Bjørn Olav; Roalkvam, Irene; Dahle, Håkon; Pedersen, Rolf B. 2014. Exploring the biotechnological potential of microbial communities in the Jan Mayen Vent Fields by use of in situ incubation chambers.
  • Drønen, Asbjørg Karine; Steen, Ida Helene; Liengen, Turid; Roalkvam, Irene. 2013. Microbial monitoring of Sub Sea injection water in the North Sea.
  • Steen, Ida Helene; Julianne, Wissuwa; Steinsbu, Bjørn Olav; Roalkvam, Irene; Dahle, Håkon; Pedersen, Rolf B. 2013. Exploring the biotechnological potential of microbial communities in the Jan Mayen Vent Fields by use of in situ incubation chambers.
  • Drønen, Asbjørg Karine; Roalkvam, Irene; Liengen, Turid; Steen, Ida Helene. 2013. Better handling of microbial influenced corrosion during operation.
  • Dahle, Håkon; Roalkvam, Irene; Thorseth, Ingunn Hindenes; Pedersen, Rolf B.; Steen, Ida Helene. 2012. Metatranscriptomic and phylogenetic analysis of bacterial mats growing on chimney surfaces at the Loki´s Castle hydrothermal field.
  • Eickmann, Benjamin; Roalkvam, Irene; Baumberger, Tamara; Dahle, Hakon; Steen, Ida Helene; Thorseth, Ingunn Hindenes; Pedersen, Rolf B. 2012. A combined SEM, isotope, and biomolecular study to unravel the formation of barite chimnneys at the Loki's Castle vent field.
  • Roalkvam, Irene; Chen, Yifeng; Daae, Frida Lise; Hocking, William Peter; Lanzén, Anders; Stokke, Runar; Haflidason, Haflidi; Steen, Ida Helene. 2010. Vertical variations in predominance of Thaumarchaeota and anaerobic methanotrophs in methane seep sediments.
  • Hocking, William Peter; Roalkvam, Irene; Stokke, Runar; Steen, Ida Helene. 2010. Transcriptome analysis of Arhcaeoglobus fulgidus VC-16 grown on differential substrates.
  • Haflidason, Haflidi; Steen, Ida Helene; Roalkvam, Irene; Hocking, William Peter; Hjelstuen, Berit Oline Blihovde; Chen, Yifeng; Daae, Frida Lise. 2010. The sulfate-methane transition zone (SMTZ) in passive and active gas hydrate bearing sediments at Nyegga on the Mid-Norwegian margin: a multidisciplinary geological, geobiological and geochemical study.
  • Dahle, Håkon; Roalkvam, Irene; Jørgensen, Steffen Leth; Hoem, Solveig; Mitra, Suparna; Huson, Daniel; Tooming-Klunderud, Ave ; Thorseth, Ingunn Hindenes; Pedersen, Rolf-Birger; Steen, Ida Helene. 2010. Microbial community structure of biomats and chimney walls of the Loki’s Castle hydrothermal field at 73°N.
  • Hoem, Solveig; Dahle, Håkon; Roalkvam, Irene; Thorseth, Ingunn Hindenes; Pedersen, Rolf-Birger; Steen, Ida Helene. 2010. Detection of methanotrophic archaea in a barite chimney at Loki’s Castle, the Arctic Mid-Ocean Ridge.
  • Roalkvam, Irene; Stokke, Runar; Hocking, William Peter; Steen, Ida Helene. 2009. Decreased expression of ATP-sulfurylase and APS-reductase in Archaeoglobus fulgidus during respiration of hydrogen with thiosulfate.
  • Roalkvam, Irene; Stokke, Runar; Fladmark, Kari Espolin; Steen, Ida Helene. 2008. The hyperthermophilic sulfate-reducing archaeon Archaeoglobus fulgidus; a proteomics study on the shift between chemoorganoheterotrophic and chemilithoautotrophic growth.
Article in business/trade/industry journal
  • Drønen, Karine; Roalkvam, Irene; Nilsen, Hanne Katrine; Olsen, Anne Berit; Dahle, Håkon; Wergeland, Heidrun Inger. 2018. Biofilterprosesser i endring over tid. Nf xpert : en spesialutgave av Norsk fiskeoppdrett. 46-48.

More information in national current research information system (CRIStin)

Roalkvam, I., Drønen, K. (2016). Two case studies of corrosion from an injection water pipeline in the North Sea: Corrosion control due to operation management and high corrosion potential due to nitrate mitigation, Microbiologically Influenced Corrosion in the Upstream Oil and Gas Industry, editor: Lee, Skovhus and Enning, CRC Press Taylor & Francis, Florida US, ISBN 9781498726566.

Bauer, S.L.M., Roalkvam, I., Steen, I. H., Dahle, H. (2016). Lutibacter profundi sp. nov., isolated from a deep-sea hydrothermal system on the Arctic Mid-Ocean Ridge. International Journal of Systematic and Evolutionary Microbiology, 66:2671-2677.

Steen, I. H., Dahle, H., Stokke, R., Roalkvam, I., Daae, F. L., Rapp, H. T., Pedersen, R. B., Thorseth, I. H. (2016). Novel barite chimneys at the Loki´s Castle Vent Field shed light on key factors shaping microbial communities and functions in hydrothermal systems. Frontiers in Microbiology, doi: 10.3389/fmicb.2015.01510.

Roalkvam, I., Drønen, K., Stokke, R., Daae, F. L., Dahle, H., Steen, I. H. (2015). Physiological and genomic characterization of Arcobacter anaerophilus IR-1 reveals new metabolic features in Epsilonproteobacteria. Frontiers in Microbiology, 6:987.

Roalkvam, I., Bredy, F., Baumberger, T., Pedersen, R. B., Steen, I. H. (2015). Hypnocyclicus thermotrophus gen. nov. sp. nov. isolated from a microbial mat situated in a hydrothermal vent field in the Greenland Sea. International Journal of Systematic and Evolutionary Microbiology, doi:10.1099/ijsem.0.000606.

Hocking, W. P., Roalkvam, I., Magnussen, C., Stokke, R., Steen, I. H. (2015). Assessment of the carbon monoxide metabolism of the hyperthermophilic sulfate-reducing archaeon Archaeoglobus fulgidus VC-16 by comparative transcriptome analyses. Archaea, 2015:12.

Stokke, R., Dahle. H., Roalkvam, I., Wissuwa J., Daae, F. L., Tooming-Klunderud, A., Thorseth, I. H., Pedersen, R. B., Steen, I. H. (2015). Functional interactions among filamentous Epsilonproteobacteria and Bacteroidetes in deep-sea hydrothermal vent biofilm. Environmental Microbiology, doi:10.1111/1462-2920.12970.

Drønen, K., Roalkvam, I., Beeder, J., Torsvik, T., Steen, I. H., Skauge, A., Liengen T. (2014). Modeling of heavy nitrate corrosion in anaerobe aquifer injection water biofilm: a case study in a flow rig. Environmental Science and Technology, 15:8627-35.

Hocking, W. P., Stokke, R., Roalkvam, I., Steen, I. H. (2014). Identification of key components in the energy metabolism of the hyperthermophilic sulfate-reducing archaeon Archaeoglobus fulgidus by transcriptome analyses. Frontiers in Microbiology, 5:95.

Dahle, H., Roalkvam, I., Thorseth, I., Pedersen, R. B., Steen, I. H. (2013). The versatile in situ gene expression of an Epsilonproteobacteria-dominated biofilm from a hydrothermal chimney. Environmental Microbiology Reports, 2:282-90.

Roalkvam, I., Dahle, H., Chen, Y., Jørgensen, S. L., Haflidason, H. & Steen, I. H. (2012). Fine-scale community structure analysis of ANME in Nyegga sediments with high and low methane flux. Frontiers in Extreme Microbiology, 3:216.

Stokke, R., Roalkvam, I., Lanzén, A., Haflidason, H., Steen, I. (2012). Integrated metagenomic and metaproteomic analyses of an ANME-1 dominated community in marine cold-seep sediments. Environmental Microbiology, 13(5):1333-1346.

Roalkvam, I., Jørgensen, S. L., Chen, Y., Stokke, R., Dahle, H., Hocking, W. P., Lanzén, A., Haflidason, H., Steen, I. H. (2011). New insight into stratification of anaerobic methanotrophs in cold seep sediments. FEMS Microbiology Ecology, 78(2):233-43.

2017-: Adapting monitoring tools for bacterial load detection in closed marine fish farms: for improved fish health and reduced mortalities (MONITOR). Funding from Research Council of Norway.

2015-2017: Industrial Applications of Marine Enzymes (INMARE); Innovative screening and expression platforms to discover and use the functional protein diversity from the sea. Funding from the EU Horizon 2020 Program. More info.

2012-2016: Better handling of microbial influenced corrosion during operation. Post. doc project. Fundied by VISTA.

2009-2012: Diversity, stratification and in situ metabolism of anaerobic methanotrophic archaea in Nyegga cold seeps. Ph.D project. Funded by VISTA.

 

Research groups