Jan Byška

Associate Professor

Academic article

Show author(s) 2020. Visual exploration of large normal mode spaces to study protein flexibility. Computers & graphics. 73-83.
Show author(s) 2020. PINGU Principles of Interactive Navigation for Geospatial Understanding. IEEE Pacific Visualization Symposium.
Show author(s) 2020. Multiscale Visual Drilldown for the Analysis of Large Ensembles of Multi-Body Protein Complexes. IEEE Transactions on Visualization and Computer Graphics. 843-852.
Show author(s) 2020. Dynamics-function relationship in the catalytic domains of N-terminal acetyltransferases. Computational and Structural Biotechnology Journal. 532-547.
Show author(s) 2020. DockVis: Visual Analysis of Molecular Docking Trajectories. Computer Graphics Forum. 452-464.

Show author(s) 2019. Visual Analysis of Ligand Trajectories in Molecular Dynamics . IEEE Pacific Visualization Symposium. 212-221.
Show author(s) 2019. Scale-Space Splatting: Reforming Spacetime for Cross-Scale Exploration of Integral Measures in Molecular Dynamics. IEEE Transactions on Visualization and Computer Graphics. 643-653.
Show author(s) 2019. Analysis of Long Molecular Dynamics Simulations Using Interactive Focus+Context Visualization. Computer Graphics Forum. 441-453.

Show author(s) 2018. COZOID: contact zone identifier for visual analysis of protein-protein interactions. BMC Bioinformatics. 1-17.
Show author(s) 2018. CAVER Analyst 2.0: analysis and visualization of channels and tunnels in protein structures and molecular dynamics trajectories. Bioinformatics. 3586-3588.
Show author(s) 2018. A de novo Ser111Thr variant in aquaporin-4 in a patient with intellectual disability, transient signs of brain ischemia, transient cardiac hypertrophy, and progressive gait disturbance. Cold Spring Harbor Molecular Case Studies.

Show author(s) 2017. Interactive Exploration of Ligand Transportation through Protein Tunnels. BMC Bioinformatics.
Show author(s) 2017. Comparative Visualization of Protein Secondary Structures. BMC Bioinformatics.

Show author(s) 2016. Unfolding and Interactive Exploration of Protein Tunnels and their Dynamics. Eurographics Workshop on Visual Computing for Biomedicine.
Show author(s) 2016. AnimoAminoMiner: exploration of protein tunnels and their properties in molecular dynamics. IEEE Transactions on Visualization and Computer Graphics. 747-756.

Academic lecture

Show author(s) 2017. Watergate: Visual Exploration of Water Trajectories in Protein Dynamics.

Academic chapter/article/Conference paper

Show author(s) 2020. Visual Analysis of Protein–Protein Interaction Docking Models Using COZOID Tool. 14 pages.

Show author(s) 2019. DockVis: Visual Analysis of Molecular Docking Data. 10 pages.