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University of Bergen
Jan Byška's picture

Jan Byška

Associate Professor
Department of Informatics
  • E-mailjan.byska@uib.no
  • Visitor Address
    HIB - Thormøhlens gate 55
    5006 Bergen
  • Postal Address
    Postboks 7803
    5020 Bergen
Academic article
  • Show author(s) (2023). xOpat: eXplainable Open Pathology Analysis Tool. Computer Graphics Forum. 63-73.
  • Show author(s) (2023). sMolBoxes: Dataflow Model for Molecular Dynamics Exploration. IEEE Transactions on Visualization and Computer Graphics. 581-590.
  • Show author(s) (2023). State of the Art of Molecular Visualization in Immersive Virtual Environments. Computer Graphics Forum.
  • Show author(s) (2021). VRdeo: Creating engaging educational material for asynchronous student-teacher exchange using virtual reality. Computers & graphics. 280-292.
  • Show author(s) (2020). Visual exploration of large normal mode spaces to study protein flexibility. Computers & graphics. 73-83.
  • Show author(s) (2020). PINGU Principles of Interactive Navigation for Geospatial Understanding. IEEE Pacific Visualization Symposium.
  • Show author(s) (2020). Multiscale Visual Drilldown for the Analysis of Large Ensembles of Multi-Body Protein Complexes. IEEE Transactions on Visualization and Computer Graphics. 843-852.
  • Show author(s) (2020). Dynamics-function relationship in the catalytic domains of N-terminal acetyltransferases. Computational and Structural Biotechnology Journal. 532-547.
  • Show author(s) (2020). DockVis: Visual Analysis of Molecular Docking Trajectories. Computer Graphics Forum. 452-464.
  • Show author(s) (2019). Visual Analysis of Ligand Trajectories in Molecular Dynamics . IEEE Pacific Visualization Symposium. 212-221.
  • Show author(s) (2019). Scale-Space Splatting: Reforming Spacetime for Cross-Scale Exploration of Integral Measures in Molecular Dynamics. IEEE Transactions on Visualization and Computer Graphics. 643-653.
  • Show author(s) (2019). Analysis of Long Molecular Dynamics Simulations Using Interactive Focus+Context Visualization. Computer Graphics Forum. 441-453.
  • Show author(s) (2018). COZOID: contact zone identifier for visual analysis of protein-protein interactions. BMC Bioinformatics. 1-17.
  • Show author(s) (2018). CAVER Analyst 2.0: analysis and visualization of channels and tunnels in protein structures and molecular dynamics trajectories. Bioinformatics. 3586-3588.
  • Show author(s) (2018). A de novo Ser111Thr variant in aquaporin-4 in a patient with intellectual disability, transient signs of brain ischemia, transient cardiac hypertrophy, and progressive gait disturbance. Cold Spring Harbor Molecular Case Studies.
  • Show author(s) (2017). Interactive Exploration of Ligand Transportation through Protein Tunnels. BMC Bioinformatics.
  • Show author(s) (2017). Comparative Visualization of Protein Secondary Structures. BMC Bioinformatics.
  • Show author(s) (2016). Unfolding and Interactive Exploration of Protein Tunnels and their Dynamics. Eurographics Workshop on Visual Computing for Biomedicine.
  • Show author(s) (2016). AnimoAminoMiner: exploration of protein tunnels and their properties in molecular dynamics. IEEE Transactions on Visualization and Computer Graphics. 747-756.
Academic lecture
  • Show author(s) (2017). Watergate: Visual Exploration of Water Trajectories in Protein Dynamics.
Editorial
  • Show author(s) (2023). Foreword: Special section on Molecular Graphics and Visual Analysis of Molecular Data (MolVA 2023). Computers & graphics. A5.
  • Show author(s) (2021). Foreword to the special section on molecular graphics and visual analysis of molecular data (MolVA 2021). Computers & graphics. A7-A8.
Academic chapter/article/Conference paper
  • Show author(s) (2020). Visual Analysis of Protein–Protein Interaction Docking Models Using COZOID Tool. 14 pages.
  • Show author(s) (2019). DockVis: Visual Analysis of Molecular Docking Data. 10 pages.

More information in national current research information system (CRIStin)