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Jean-Marie Bouquet

Chief Engineer
  • E-mailJean-marie.Bouquet@uib.no
  • Phone+47 473 63 709
  • Visitor Address
    Thormøhlensgt. 53 A/B
  • Postal Address
    Postboks 7803
    5020 Bergen
Journal articles
  • Bouquet, Jean-Marie; Troedsson, Christofer; Novac, Aliona; Reeve, Magnus; Lechtenbörger, Anna K.; Massart, Wendy; Skaar, Katrine Sandnes; Aasjord, Anne; Dupont, Sam; Thompson, Eric. 2018. Increased fitness of a key appendicularian zooplankton species under warmer, acidified seawater conditions. PLOS ONE. 13:e0190625: 1-19. doi: 10.1371/journal.pone.0190625
  • Conley, Keats R; Gemmell, Brad J; Bouquet, Jean-Marie; Thompson, Eric; Sutherland, Kelly R. 2018. A self‐cleaning biological filter: How appendicularians mechanically control particle adhesion and removal. Limnology and Oceanography. 63: 927-938. doi: 10.1002/lno.10680
  • Winder, Monika; Bouquet, Jean-Marie; Bermúdez, J. Rafael; Berger, Stella Angela; Hansen, Thomas; Brandes, Jay; Sazhin, Andrey F.; Nejstgaard, Jens Christian; Båmstedt, Ulf; Jakobsen, Hans H.; Dutz, Jörg; Frischer, Marc; Troedsson, Christofer; Thompson, Eric. 2017. Increased appendicularian zooplankton alter carbon cycling under warmer more acidified ocean conditions. Limnology and Oceanography. 62: 1541-1551. doi: 10.1002/lno.10516
  • Bouquet, Jean-Marie. 2015. monthly science magazine issued in France since 1913) - Contribution with an illustration to an article published in the number 1174, July 2015; p63. Science & Vie.
  • Marti-Solans, Josep; Ferrandez-Roldan, Alfonso; Godoy-Marin, Hector; Badia-Ramentol, Jordi; Torres-Aguila, Nuria P; Rodriguez-Mari, Adriana; Bouquet, Jean-Marie; Chourrout, Daniel; Thompson, Eric; Albalat, Ricard; Canestro, Cristian. 2015. Oikopleura dioica culturing made easy: A Low-Cost facility for an emerging animal model in EvoDevo. Genesis. 53: 183-193. doi: 10.1002/dvg.22800
  • Calbet, Albert; Sazhin, Andrey F.; Nejstgaard, Jens Christian; Berger, Stella Angela; Tait, Zachary S.; Olmos, Lorena; Sousoni, Despoina; Isari, Stamatina; Martinez, Rodrigo A.; Bouquet, Jean-Marie; Thompson, Eric; Båmstedt, Ulf; Jakobsen, Hans H. 2014. Future climate scenarios for a coastal productive planktonic food web resulting in microplankton phenology changes and decreased trophic transfer efficiency. PLOS ONE. 9. doi: 10.1371/journal.pone.0094388
  • Lobon, Carla M.; Bouquet, Jean-Marie; Reeve, Magnus; Novac, Aliona; Acuña, José-Luis; Thompson, Eric; Troedsson, Christofer. 2013. Response of the pelagic tunicate appendicularian, Oikopleura dioica to controlled simulations of a strong bloom condition: A bottom-up perspective. Limnology and Oceanography. 58: 215-226. doi: 10.4319/lo.2013.58.1.0215
  • Troedsson, Christofer; Bouquet, Jean-Marie; Lobon, Carla M.; Novac, Aliona; Nejstgaard, Jens Christian; Dupont, Sam; Bosak, Sunčica; Jakobsen, Hans Henrik; Romanova, natalya; Pankoke, Lene M.; Isla, Alejandro; Dutz, Jörg; Sazhin, Andrey F.; Thompson, Eric. 2013. Effects of ocean acidification, temperature and nutrient regimes on the appendicularian Oikopleura dioica: a mesocosm study. Marine Biology. 160: 2175-2187. doi: 10.1007/s00227-012-2137-9
  • Yadetie, Fekadu; Butcher, Stephen; Førde, Hilde Elise Sundsøy; Campsteijn, Coen; Bouquet, Jean-Marie; Karlsen, Odd Andre; Denoeud, France; Metpally, Raghu; Thompson, Eric; Manak, J Robert; Goksøyr, Anders; Chourrout, Daniel. 2012. Conservation and divergence of chemical defense system in the tunicate Oikopleura dioica revealed by genome wide response to two xenobiotics. BMC Genomics. 13. 17 pages. doi: 10.1186/1471-2164-13-55
  • Kugler, Jamie E.; Kerner, Pierre; Bouquet, Jean-Marie; Jiang, Di; Gregorio, Anna Di. 2011. Evolutionary changes in the notochord genetic toolkit: a comparative analysis of notochord genes in the ascidian Ciona intestinalis ant the larvacean Oikopleura dioiac. BMC Evolutionary Biology. 11: 21-36.
  • Denoeud, France; Henriet, Simon; Mungpakdee, Sutada; Aury, Jean-Marc; Da Silva, Corinne; Brinkmann, Henner; Mikhaleva, Iana; Olsen, Lisbeth Charlotte; Jubin, Claire; Canestro, Cristian; Bouquet, Jean-Marie; Danks, Gemma Barbara; Poulain, Julie; Campsteijn, Coen; Adamski, Marcin; Cross, Ismael; Yadetie, Fekadu; Muffato, Matthieu; Louis, Alexandra; Butcher, Stephen; Tsagkogeorga, Georgia; Konrad, Anke; Singh, Sarabdeep; Jensen, Marit Flo; Cong, Evelyne Huynh; Otterå, Helen Eikeseth; Noel, Benjamin; Anthouard, Veronique; Porcel, Betina M; Kachouri-Lafond, Rym; Nishino, Atsuo; Ugolini, Matteo; Chourrout, Pascal; Nishida, Hiroki; Aasland, Rein; Huzurbazar, Snehalata; Westhof, Eric; Delsuc, Frédéric; Lehrach, Hans; Reinhardt, Richard; Weissenbach, Jean; Roy, Scott W; Artiguenave, Francois; Postlethwait, John H; Manak, J Robert; Thompson, Eric; Jaillon, Olivier; Du Pasquier, Louis; Boudinot, Pierre; Liberles, David A; Volff, Jean-Nicolas; Philippe, Hervé; Lenhard, Boris; Crollius, Hugues Roest; Wincker, Patric; Chourrout, Daniel. 2010. Plasticity of Animal Genome Architecture Unmasked by Rapid Evolution of a Pelagic Tunicate. Science. 330: 1381-1385. doi: 10.1126/science.1194167
  • Groison, Anne-Laure; Suquet, Marc; Cosson, Jacky; Mayer, Ian; Severe, Armelle; Bouquet, Jean-Marie; Geffen, Audrey J.; Utne-Palm, Anne Christine; Kjesbu, Olav Sigurd. 2010. Sperm motility in European hake, Merluccius merluccius, and characterization of its spermatozoa concentration and volume, spermatocrit, osmolality and pH. Aquaculture. 301: 31-36. doi: 10.1016/j.aquaculture.2010.01.026
  • Sagane, Yoshimasa; Zech, Karin; Bouquet, Jean-Marie; Schmid, Martina; Bal, Ugur; Thompson, Eric. 2010. Functional specialization of cellulose synthase genes of prokaryotic origin in chordate larvaceans. Development. 137: 1483-1492. doi: 10.1242/dev.044503
  • Bouquet, Jean-Marie; Spriet, Endy; Troedsson, Christofer; Otterå, Helen Eikeseth; Chourrout, Daniel; Thompson, Eric. 2009. Culture optimization for the emergent zooplanktonic model organism Oikopleura dioica. Journal of Plankton Research. 21: 359-370. doi: 10.1093/plankt/fbn132
  • Troedsson, Christofer; Bouquet, Jean-Marie; Skinnes, Ragnhild; Acuña, José-Luis; Acuna, Jose L.; Zech, Karin; Frischer, Marc E.; Thompson, Eric. 2009. Regulation of filter-feeding house components in response to varying food regimes in the appendicularian, Oikopleura dioica. Journal of Plankton Research. 31: 1453-1463. doi: 10.1093/plankt/fbp085
  • Clarke, Thomas; Bouquet, Jean-Marie; Fu, Xianghui; Kallesøe, Torben; Schmid, Martina; Thompson, Eric. 2007. Rapidly evolving lamins in a chordate, Oikopleura dioica, with unusual nuclear architecture. Gene. 396: 159-169. doi: 10.1016/j.gene.2007.03.006
  • Ganot, Philippe Jorgen; Bouquet, Jean-Marie; Kallesøe, Torben; Thompson, Eric. 2007. The Oikopleura coenocyst, a unique chordate germ cell permitting rapid, extensive modulation of oocyte production. Developmental Biology. 302: 591-600. doi: 10.1016/j.ydbio.2006.10.021
  • Troedsson, Christofer; Ganot, Philippe Jorgen; Bouquet, Jean-Marie; Aksnes, Dag Lorents; Thompson, Eric. 2007. Endostyle cell recruitment as a frame of reference for development and growth in the urochordate Oikopleura dioica. The Biological Bulletin. 213: 325-334.
  • Ganot, Philippe Jorgen; Bouquet, Jean-Marie; Thompson, Eric. 2006. Comparative organization of follicle, accessory cells and spawning anlagen in dynamic semelparous clutch manipulators, the urochordate Oikopleuridae. Biology of the Cell. 98: 389-401. doi: 10.1042/BC20060005
Reports and theses
  • Bouquet, Jean-Marie. 2017. Response of the gelatinous zooplankton Oikopleura dioica to warmer, acidified seawater conditions. University of Bergen.

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