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Marta Eide

Senior Adviser, Centre for Digital Life Norway
Department of Informatics
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  • E-mailmarta.eide@uib.no
  • Phone+47 55 58 44 24
  • Visitor Address
    HIB - Thormøhlens gate 55
    5006 Bergen
  • Postal Address
    Postboks 7803
    5020 Bergen

I am senior adviser in the 'Data and models' activities in Centre for Digital Life Norway, DLN2.0.

My background is in molecular biology and environmental toxicology from the University of Bergen. I have studied how environmental contaminants effect organisms through molecular targets, and how such targets can be identified in the genome. Previous to my current position, I was postdoc and project coordinator of the transdisciplinary dCod 1.0 project, where toxicologists, biologists, bioinformaticians and mathematicians aim to understand the responses of pollutants in Atlantic cod. 

I have the Instagram profile @marta_forskar, where I share illustrated insigts into environmental toxicology, biotechnology, and life in akademia. This work is supported by the Centre for Digital Life Norway.

Academic article
  • Show author(s) (2021). The chemical defensome of five model teleost fish. Scientific Reports. 1-13.
  • Show author(s) (2020). ReCodLiver0.9: Overcoming Challenges in Genome-Scale Metabolic Reconstruction of a Non-model Species. Frontiers in Molecular Biosciences. 10 pages.
  • Show author(s) (2018). RNA-Seq analysis of transcriptome responses in Atlantic cod (Gadus morhua) precision-cut liver slices exposed to benzo[a]pyrene and 17α-ethynylestradiol. Aquatic Toxicology. 174-186.
  • Show author(s) (2018). Independent losses of a xenobiotic receptor across teleost evolution. Scientific Reports. 1-13.
  • Show author(s) (2016). Single and mixture effects of aquatic micropollutants studied in precision-cut liver slices of Atlantic cod (Gadus morhua). Aquatic Toxicology. 395-404.
  • Show author(s) (2014). Precision-cut liver slices of Atlantic cod (Gadus morhua): An in vitro system for studying the effects of environmental contaminants. Aquatic Toxicology. 110-115.
  • Show author(s) (2014). Liver transcriptome analysis of Atlantic cod (Gadus morhua) exposed to PCB 153 indicates effects on cell cycle regulation and lipid metabolism. BMC Genomics.
  • Show author(s) (2014). A characterization of the ZFL cell line and primary hepatocytes as in vitro liver cell models for the zebrafish (Danio rerio). Aquatic Toxicology. 7-17.
Lecture
  • Show author(s) (2022). Complex mixture and omics responses in Atlantic cod: a time- and dose-response study.
  • Show author(s) (2019). Chemical warfare in the marine environment.
  • Show author(s) (2019). A draft metabolic reconstruction of Atlantic cod (Gadus morhua) liver: how to and what for?
Academic lecture
  • Show author(s) (2020). A multi-omics approach to study Ppar-mediated regulation of lipid metabolism in Atlantic cod (Gadus morhua).
  • Show author(s) (2019). dCOD 1.0: DECODING THE SYSTEMS TOXICOLOGY OF ATLANTIC COD (GADUS MORHUA) – HIGHLIGHTS SO FAR.
  • Show author(s) (2019). Toxicogenomic responses in Atlantic cod (Gadus morhua) after treatment with selected environmental contaminants in vivo and ex vivo.
  • Show author(s) (2019). The chemical defensome of Atlantic cod (Gadus morhua).
  • Show author(s) (2019). EFFECTS OF SELECTED ENVIRONMENTAL ESTROGENS ON EXPRESSION OF FIBROBLAST GROWTH FACTOR SIGNALING PATHWAY GENES IN THE LIVER OF ATLANTIC COD (GADUS MORHUA) IN VIVO AND EX VIVO.
  • Show author(s) (2018). dCOD 1.0: DECODING THE SYSTEMS TOXICOLOGY OF ATLANTIC COD (GADUS MORHUA).
  • Show author(s) (2018). The nuclear receptor complement of Atlantic cod (Gadus morhua) as potential targets for endocrine disrupting compounds.
  • Show author(s) (2018). RNA-seq analysis of transcriptome responses in Atlantic cod (Gadus morhua) precision cut liver slices exposed to benzo[a]pyrene and 17α-ethynylestradiol.
  • Show author(s) (2018). RNA-seq analysis of transcriptome responses in Atlantic cod (Gadus morhua) precision cut liver slices exposed to benzo[a]pyrene and 17α-ethynylestradiol.
  • Show author(s) (2018). Modelling the chemical defensome networks --- a dynamic visualisation of the involved genes and interactions in two fish species and human.
  • Show author(s) (2018). Modelling the chemical defensome network - a dynamic visualisation of the involved genes and pathways in two fish species and humans .
  • Show author(s) (2018). Modelling The Chemical Defensome Networks - A Comparative Dynamic Visualisation Of The Involved Genes And Interactions In Two Fish Species And Humans.
  • Show author(s) (2018). Ecotoxicological responses in Atlantic cod (Gadus morhua) after caging at a capped waste disposal site in Kollevåg, Western Norway .
  • Show author(s) (2018). Ecotoxicological responses in Atlantic cod (Gadus morhua) after caging at a capped waste disposal site in Kollevåg, Western Norway .
  • Show author(s) (2018). Discovering pathway perturbations with topological edge set enrichment analysis (TESEA).
  • Show author(s) (2018). Adverse health effects related to chemical exposure in Atlantic cod (Gadus morhua) from Norwegian fjords.
  • Show author(s) (2017). PRECISION-CUT LIVER SLICES (PCLS) FOR TOXICOGENOMIC STUDIES IN ATLANTIC COD (Gadus morhua): THE dCOD 1.0 PROJECT.
  • Show author(s) (2017). Integrative transcriptome and proteome analysis reveals perturbation of lipid metabolic pathways in the liver of Atlantic cod (Gadus morhua) treated with PCB 153.
  • Show author(s) (2017). CHARACTERIZATION OF THE ARYL HYDROCARBON RECEPTORS AHR1B AND AHR2 IN ATLANTIC COD (GADUS MORHUA).
  • Show author(s) (2016). Toxicogenomics as a tool for understanding responses to pollutants in organisms: Using Atlantic cod (Gadus morhua) and a systems biology approach to environmental toxicology.
  • Show author(s) (2016). Integrative -omics analyses reveal perturbation of lipid metabolic pathways in the liver of Atlantic cod (Gadus morhua) exposed to the persistent organic pollutant PCB 153.
  • Show author(s) (2016). Chemical warfare in the marine environment: genomic survey of the Atlantic cod (Gadus morhua) defensome reveals the absence of an important xenosensor.
Popular scientific article
  • Show author(s) (2021). Slik kan Forskingsrådet sørge for meir deling av forskingsdata. Khrono.no.
Feature article
  • Show author(s) (2021). Slik kan Forskingsrådet sørge for meir deling av forskingsdata. Khrono.no.
  • Show author(s) (2018). Torsken manglar eit viktig gen i forsvaret mot miljøgifter. Forskning.no.
Doctoral dissertation
  • Show author(s) (2016). Experimental systems for studying toxicological responses in teleost species. In vitro, ex vivo and in silico studies of zebrafish (Danio rerio) and Atlantic cod (Gadus morhua).
Interview
  • Show author(s) (2020). Intervjua på NRK Nyhetsmorgen i samband med Instagram-kontoen @Marta_forskar.
  • Show author(s) (2019). Forskarar bura torsken inne for å studere effektane av miljøgifter.
Abstract
  • Show author(s) (2012). Integrative environmental genomics of cod (Gadus morhua) reveal the mechanisms underlying MeHg- and PCB153 induced toxicity. Comparative Biochemistry and Physiology A. S49-S49.
Poster
  • Show author(s) (2019). dCOD 1.0: DECODING THE SYSTEMS TOXICOLOGY OF ATLANTIC COD (GADUS MORHUA) – HIGHLIGHTS SO FAR.
  • Show author(s) (2019). THE CHEMICAL DEFENSOME OF ATLANTIC COD (GADUS MORHUA): HOW DOES IT DIFFER FROM DEFENSOME NETWORKS IN OTHER TELEOST SPECIES?
  • Show author(s) (2019). Chemical warfare in the aquatic environment - The chemical defensome networks of model fish species.
  • Show author(s) (2019). A draft metabolic reconstruction of Atlantic cod (Gadus morhua) liver .
  • Show author(s) (2018). MODELLING THE CHEMICAL DEFENSOME NETWORKS - a comparative visualisation of the defense genes and interactions in two fish species and human.
  • Show author(s) (2017). dCod 1.0: decoding the systems toxicology of Atlantic cod (Gadus morhua).
  • Show author(s) (2017). dCod 1.0: decoding the systems toxicology of Atlantic cod (Gadus morhua) - WP8: biomarkers and xenosensors.
  • Show author(s) (2017). dCod 1.0: decoding the systems toxicology of Atlantic cod (Gadus morhua) - WP8: biomarkers and xenosensors.
  • Show author(s) (2017). dCod 1.0 decoding the systems toxicology of Atlantic cod.
  • Show author(s) (2017). Using precision-cut liver slices (PCLS) and luciferase reporter gene assays to characterise the aryl hydrocarbon receptors (Ahr) in Atlantic cod (Gadus morhua).
  • Show author(s) (2017). Using precision-cut liver slices (PCLS) and luciferase reporter gene assays to characterise the aryl hydrocarbon receptors (Ahr) in Atlantic cod (Gadus morhua).
  • Show author(s) (2017). Using precision-cut liver slices (PCLS) and luciferase reporter gene assays to characterise the aryl hydrocarbon receptors (Ahr) in Atlantic cod (Gadus morhua).
  • Show author(s) (2017). Ecotoxicological responses in Atlantic cod (Gadus morhua) following caging near a previously capped waste disposal site in Kollevågen, Askøy, Norway .
  • Show author(s) (2017). Ecotoxicological responses in Atlantic cod (Gadus morhua) following caging near a previously capped waste disposal site in Kollevågen, Askøy, Norway .
  • Show author(s) (2017). Ecotoxicological responses in Atlantic cod (Gadus morhua) following caging near a previously capped waste disposal site in Kollevågen, Askøy, Norway .
  • Show author(s) (2016). Using precision-cut liver slices (PCLS) and luciferase reporter gene assay to characterize the aryl hydrocarbon receptors (Ahr) in Atlantic cod (Gadus morhua).
  • Show author(s) (2016). Systems Toxicology Studies to Investigate Mechanisms of Toxicity of Environmental Chemicals Using Atlantic cod (Gadus morhua) as a Model Organism.
  • Show author(s) (2016). Integrated analysis of transcriptome and proteome reveals perturbation of lipid metabolic pathways in the liver of Atlantic cod (Gadus morhua) treated with the persistent organic pollutant PCB 153 .
  • Show author(s) (2016). Effektar på lipidmetabolismen til atlanterhavstorsk (Gadus morhua) etter eksponering mot enkeltsambindingar og blandingar av miljøgiftar.
  • Show author(s) (2012). Integrative environmental genomics of Atlantic cod (Gadus morhua): exposure of cod liver slices to environmental contaminants.

More information in national current research information system (CRIStin)

Fields of competence 
Data Management
Environmental Toxicology
Molecular Biology
Science communication

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Related content 
dCod 1.0 logo

dCod 1.0: Decoding the systems toxicology of Atlantic cod

dCod, Research project, Centre for Digital Life Norway, Environmental toxicology, Transdisiplinary, Modeling