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Morten Brun

Associate Professor
  • E-mailMorten.Brun@uib.no
  • Phone+47 55 58 27 98
  • Visitor Address
    Realfagbygget, Allégt. 41
  • Postal Address
    Postboks 7803
    5020 Bergen
Academic article
  • Blaser, Nello; Brun, Morten. 2019. Sparse Nerves in Practice. Lecture Notes in Computer Science (LNCS). 272-284.
  • Brun, Morten; Blaser, Nello. 2019. Sparse Dowker nerves. Journal of Applied and Computational Topology.
  • Nilsen, Geir Kjetil; Brun, Morten; Zanna, Antonella; Skaug, Hans J. 2019. Efficient Computation of Hessian Matrices in TensorFlow . arXiv.org.
  • Bader, Lucius; Gullaksen, Stein-Erik; Blaser, Nello; Brun, Morten; Bringeland, Gerd Haga; Sulen, Andre; Gjesdal, Clara Gram; Vedeler, Christian A.; Gavasso, Sonia. 2019. Candidate markers for stratification and classification in rheumatoid arthritis. Frontiers in Immunology. 1-8.
  • Brun, Morten; Blaser, Nello. 2018. Sparse Filtered Nerves . arXiv.org.
  • Yadetie, Fekadu; Zhang, Xiaokang; Hanna, Eileen Marie; Aranguren-Abadía, Libe; Eide, Marta; Blaser, Nello; Brun, Morten; Jonassen, Inge; Goksøyr, Anders; Karlsen, Odd Andre. 2018. RNA-Seq analysis of transcriptome responses in Atlantic cod (Gadus morhua) precision-cut liver slices exposed to benzo[a]pyrene and 17α-ethynylestradiol. Aquatic Toxicology. 174-186.
  • Blaser, Nello; Brun, Morten. 2018. Divisive Cover. Mathematics in Computer Science. 1-9.
  • Brun, Morten; Blaser, Nello. 2017. Filtered covers. arXiv.org.
  • Fløystad, Gunnar; Brun, Morten. 2011. The Auslander-Reiten translate on monomial ideals. Advances in Mathematics. 952-991.
  • Brun, Morten; Carlsson, Gunnar; Dundas, Bjørn Ian. 2010. Covering homology. Advances in Mathematics. 3166-3213.
  • Reber, Rolf; Brun, Morten; Mitterndorfer, Karoline. 2008. The use of heuristics in intuitive mathematical judgment. Psychonomic Bulletin & Review. 1174-1178.
  • Brun, Morten. 2007. Witt vectors and equivariant ring spectra applied to cobordism. Proceedings of the London Mathematical Society. 351-385.
  • Brun, Morten; Fiedorowicz, Zbigniew; Vogt, Rainer. 2007. On the multiplicative structure of topological Hochschild homology. Algebraic and Geometric Topology. 1633-1650.
  • Brun, Morten. 2005. Witt vectors and Tambara functors. Advances in Mathematics. 233-256.
  • Brun, Morten; Roemer, Tim. 2005. Subdivisions of toric complexes. Journal of Algebraic Combinatorics. 423-448.
Academic lecture
  • Goksøyr, Anders; Alendal, Guttorm; Aranguren-Abadía, Libe; Arukwe, Augustine; Blaser, Nello; Brun, Morten; Celander, Malin; Dale, Karina; Denslow, Nancy; Eide, Marta; Fallahi, Shirin; Goksøyr, Siri Øfsthus; Goldstone, Jared V.; Grøsvik, Bjørn Einar; Hanna, Eileen Marie; Hylland, Ketil; Jonassen, Inge; Khan, Essa Ahsan; Lille-Langøy, Roger; Lyche, Jan Ludvig; Müller, Mette Helen Bjørge; Olsvik, Pål Asgeir; Pampanin, Daniela Maria; Porte, Cinta; Skaug, Hans J.; Tairova, Zhanna; Yadetie, Fekadu; Zhang, Xiaokang; Karlsen, Odd Andre. 2019. dCOD 1.0: DECODING THE SYSTEMS TOXICOLOGY OF ATLANTIC COD (GADUS MORHUA) – HIGHLIGHTS SO FAR.
  • Yadetie, Fekadu; Zhang, Xiaokang; Hanna, Eileen Marie; Reboa, Anna; Aranguren-Abadía, Libe; Eide, Marta; Blaser, Nello; Brun, Morten; Jonassen, Inge; Goksøyr, Anders; Karlsen, Odd Andre. 2019. Toxicogenomic responses in Atlantic cod (Gadus morhua) after treatment with selected environmental contaminants in vivo and ex vivo.
  • Brun, Morten; Blaser, Nello. 2019. Sparse Nerves in Practice.
  • Yadetie, Fekadu; Zhang, Xiaokang; Hanna, Eileen Marie; Reboa, Anna; Aranguren-Abadía, Libe; Eide, Marta; Blaser, Nello; Brun, Morten; Jonassen, Inge; Goksøyr, Anders; Karlsen, Odd Andre. 2019. EFFECTS OF SELECTED ENVIRONMENTAL ESTROGENS ON EXPRESSION OF FIBROBLAST GROWTH FACTOR SIGNALING PATHWAY GENES IN THE LIVER OF ATLANTIC COD (GADUS MORHUA) IN VIVO AND EX VIVO.
  • Goksøyr, Anders; Alendal, Guttorm; Aranguren Abadía, Libe; Arukwe, Augustine; Blaser, Nello; Brun, Morten; Celander, Malin; Dale, Karina; Dankel, Dorothy Jane; Denslow, Nancy; Eide, Marta; Fallahi, Shirin; Frøysa, Håvard G; Ghavidel, Fatemeh; Goksøyr, Siri Øfsthus; Goldstone, Jared V.; Grøsvik, Bjørn Einar; Hanna, Eileen Marie; Hylland, Ketil; Jonassen, Inge; Khan, Essa Ahsan; Kleppe, Rune; Lille-Langøy, Roger; Lyche, Jan Ludvig; Mayer, Ian; Müller, Mette Helen Bjørge; Olsvik, Pål Asgeir; Pampanin, Daniela Maria; Porte, Cinta; Skaug, Hans J.; Stegeman, John J.; Tairova, Zhanna; Yadetie, Fekadu; Zhang, Xiaokang; Karlsen, Odd Andre. 2018. dCOD 1.0: DECODING THE SYSTEMS TOXICOLOGY OF ATLANTIC COD (GADUS MORHUA).
  • Blaser, Nello; Hanna, Eileen Marie; Brun, Morten; Eide, Marta; Yadetie, Fekadu; Goksøyr, Anders; Jonassen, Inge. 2018. Discovering pathway perturbations with topological edge set enrichment analysis (TESEA).
  • Tairova, Zhanna; Müller, Mette Helen Bjørge; Lyche, Jan Ludvig; Mayer, Ian; Berg, Vidar; Blaser, Nello; Brun, Morten; Grung, Merete; Eide, Marta; Dale, Karina; Goksøyr, Siri Øfsthus; Aranguren, Libe; Goksøyr, Anders; Ketil, Hylland. 2018. Adverse health effects related to chemical exposure in Atlantic cod (Gadus morhua) from Norwegian fjords.
  • Brun, Morten. 2017. Topological Data Analysis.
  • Brun, Morten. 2017. Sparse Filtrations.
  • Yadetie, Fekadu; Eide, Marta; Söderström, Sofie; Kolås, Mari Forshaug; Steinkopf, Oline Marie; Lille-Langøy, Roger; Aranguren, Libe; Goksøyr, Siri Øfsthus; Dale, Karina; Zhang, Xiaokang; Hanna, Eileen Marie; Blaser, Nello; Brun, Morten; Skaug, Hans J.; Karlsen, Odd Andre; Jonassen, Inge; Goksøyr, Anders. 2017. PRECISION-CUT LIVER SLICES (PCLS) FOR TOXICOGENOMIC STUDIES IN ATLANTIC COD (Gadus morhua): THE dCOD 1.0 PROJECT.
  • Blaser, Nello; Brun, Morten. 2017. Divisive cover classification.
  • Blaser, Nello; Brun, Morten. 2017. An attempt at using topology for classification.
  • Tairova, Zhanna; Müller, Mette Helen Bjørge; Lyche, Jan Ludvig; Mayer, Ian; Blaser, Nello; Brun, Morten; Grung, Merete; Goksøyr, Anders; Dale, Karina; Goksøyr, Siri Øfsthus; Aranguren, Libe; Hylland, Ketil. 2017. Adverse effects in Atlantic cod (Gadus morhua) due to environmental exposure to pollutant mixtures from the Oslofjord, Norway.
Academic chapter/article/Conference paper
  • Brun, Morten; Blaser, Nello. 2008. Sparse Nerves in Practice.
Poster
  • Goksøyr, Anders; Alendal, Guttorm; Aranguren-Abadía, Libe; Arukwe, Augustine; Blaser, Nello; Brun, Morten; Celander, Malin; Dale, Karina; Eide, Marta; Fallahi, Shirin; Goksøyr, Siri Øfsthus; Hanna, Eileen Marie; Goldstone, Jared V.; Grøsvik, Bjørn Einar; Hylland, Ketil; Jonassen, Inge; Khan, Essa Ahsan; Lille-Langøy, Roger; Lyche, Jan Ludvig; Müller, Mette Helen Bjørge; Olsvik, Pål Asgeir; Pampanin, Daniela Maria; Porte, Cinta; Skaug, Hans J.; Stegeman, John J.; Tairova, Zhanna; Yadetie, Fekadu; Zhang, Xiaokang; Karlsen, Odd Andre. 2019. dCOD 1.0: DECODING THE SYSTEMS TOXICOLOGY OF ATLANTIC COD (GADUS MORHUA) – HIGHLIGHTS SO FAR.
  • Zhang, Xiaokang; Eide, Marta; Karlsen, Odd Andre; Hanna, Eileen Marie; Brun, Morten; Blaser, Nello; Jonassen, Inge; Goksøyr, Anders. 2019. THE CHEMICAL DEFENSOME OF ATLANTIC COD (GADUS MORHUA): HOW DOES IT DIFFER FROM DEFENSOME NETWORKS IN OTHER TELEOST SPECIES?
  • Brun, Morten; Dale, Karina; Zhang, Xiaokang. 2019. Multiexposure Proteomics.
  • Hanna, Eileen Marie; Blaser, Nello; Brun, Morten; Yadetie, Fekadu; Goksøyr, Anders; Jonassen, Inge. 2018. Persistent homology and network analyses reveal key gene interactions affected by environmental pollutants in Atlantic cod.
  • Blaser, Nello; Brun, Morten; Bader, Lucius; Gavasso, Sonia. 2018. Diagnosing rheumatoid arthritis with mass cytometry using topological data analysis.
  • Goksøyr, Anders; Celander, Malin; Alendal, Guttorm; Aranguren, Libe; Arukwe, Augustine; Blaser, Nello; Brun, Morten; Dale, Karina; Eide, Marta; Fallahi, Shirin; Goksøyr, Siri Øfsthus; Grøsvik, Bjørn Einar; Karlsen, Odd Andre; Hanna, Eileen Marie; Hylland, Ketil; Jonassen, Inge; Khan, Essa Ahsan; Lille-Langøy, Roger; Lyche, Jan Ludvig; Müller, Mette Helen Bjørge; Olsvik, Pål Asgeir; Skaug, Hans J.; Tairova, Zhanna; Yadetie, Fekadu; Zamanzad Ghavidel, Fatemeh; Zhang, Xiaokang; Denslow, Nancy; Pampanin, Daniela Maria; Porte, Cinta; Goldstone, Jared V.; Stegeman, John J. 2017. dCod 1.0: decoding the systems toxicology of Atlantic cod (Gadus morhua).
  • Goksøyr, Siri Øfsthus; Goksøyr, Anders; Karlsen, Odd Andre; Yadetie, Fekadu; Eide, Marta; Dale, Karina; Aranguren, Libe; Lille-Langøy, Roger; Dankel, Dorothy Jane; Alendal, Guttorm; Brun, Morten; Skaug, Hans J.; Blaser, Nello; Fallahi, Shirin; Frøysa, Håvard G; Jonassen, Inge; Hanna, Eileen Marie; Ghavidel, Fatemeh; Zhang, Xiaokang; Arukwe, Augustine; Khan, Essa Ahsan; Celander, Malin C.; Denslow, Nancy; Grøsvik, Bjørn Einar; Hylland, Ketil; Tairova, Zhanna; Lyche, Jan Ludvig; Müller, Mette Helen Bjørge; Olsvik, Pål Asgeir; Pampanin, Daniela Maria; Porte, Cinta; Goldstone, Jed; Stegeman, John. 2017. dCod 1.0 decoding the systems toxicology of Atlantic cod.
  • Gundersen, Kristian; Blaser, Nello; Alendal, Guttorm; Brun, Morten; Skaug, Hans J.; Avlesen, Helge; Berntsen, Jarle; Blackford, Jeremy. 2017. Assessment of Topological Data Analysis and Machine Learning Technologies as Tools for Seep Detection.

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