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- 2020. Robust Distance Measures for kNN Classification of Cancer Data. Cancer Informatics. 1-9.
- 2020. Enhanced identification of significant regulators of gene expression. BMC Bioinformatics. 134.
- 2018. Measures of co-expression for improved function prediction of long non-coding RNAs. BMC Bioinformatics. 533.
- 2016. TopoICSim: A new semantic similarity measure based on gene ontology. BMC Bioinformatics.
- 2016. Feature-based classification of human transcription factors into hypothetical sub-classes related to regulatory function. BMC Bioinformatics. 16 pages.
- 2015. EpiFactors: A comprehensive database of human epigenetic factors and complexes. Database: The Journal of Biological Databases and Curation.
- 2015. A property-based analysis of human transcription factors. BMC Research Notes.
- 2014. From gene sets to properties; some potential pitfalls and tripwires.
- 2014. An overrepresentation analysis of human transcription factors.