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PROBE

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Bioinformatics for Proteomics Course, Bergen, May 12-15th 2014

We are thrilled to invite you to our ”Bioinformatics for Proteomics”-course to be held in beautiful Bergen May 12th – 15th at the Proteomics Unit at the University of Bergen (PROBE).

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The course will include lectures and practicals on open access software for the analysis of mass spectrometry generated proteomics data. Among the tools covering both protein identification and quantification are: SearchGUI, PeptideShaker, MaxQuant, Perseus and Skyline.

  

Topics Covered:

How to pick the right software? How to interpret the results? What is a protein database? How do I convert raw mass spectrometry data to the required formats? What is a proteomics search engine and how do they work? What is protein inference and why is it important? How do I validate my proteomics results? What is functional analysis of proteomics data? How do I share and reprocess proteomics data? What experimental design considerations do I need to take into account? What are the options for quantifying proteins and when should they be used?

  

Special Guest Lecture:

"Introduction to mass spectrometry based proteomics" by Prof. Dr. Lennart Martens from Ghent University and VIB, Ghent, Belgium.

 

For more details and registration please see the course details.