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Iain Johnston

Professor
  • E-postiain.johnston@uib.no
  • Besøksadresse
    Allégaten 41
    Realfagbygget
    5007 Bergen
  • Postadresse
    Postboks 7803
    5020 Bergen
Vitenskapelig artikkel
  • Vis forfatter(e) (2023). Stromule Geometry Allows Optimal Spatial Regulation of Organelle Interactions in the Quasi-2D Cytoplasm. Plant and Cell Physiology.
  • Vis forfatter(e) (2023). Stochastic organelle genome segregation through Arabidopsis development and reproduction. New Phytologist.
  • Vis forfatter(e) (2023). Mitochondrial network structure controls cell-to-cell mtDNA variability generated by cell divisions. PLoS Computational Biology.
  • Vis forfatter(e) (2023). Metabolic role of the hepatic valine/3-hydroxyisobutyrate (3-HIB) pathway in fatty liver disease. EBioMedicine. 18 sider.
  • Vis forfatter(e) (2023). Data science approaches provide a roadmap to understanding the role of abscisic acid in defence. Quantitative Plant Biology.
  • Vis forfatter(e) (2023). Cellular and environmental dynamics influence species-specific extents of organelle gene retention. Proceedings of the Royal Society of London. Biological Sciences.
  • Vis forfatter(e) (2023). Avoiding misleading estimates using mtDNA heteroplasmy statistics to study bottleneck size and selection. G3: Genes, Genomes, Genetics.
  • Vis forfatter(e) (2022). Symmetry and simplicity spontaneously emerge from the algorithmic nature of evolution. Proceedings of the National Academy of Sciences of the United States of America.
  • Vis forfatter(e) (2022). Sorting of mitochondrial and plastid heteroplasmy in Arabidopsis is extremely rapid and depends on MSH1 activity. Proceedings of the National Academy of Sciences of the United States of America.
  • Vis forfatter(e) (2022). Quantification and uncertainty of root growth stimulation by elevated CO<inf>2</inf> in a mature temperate deciduous forest. Science of the Total Environment.
  • Vis forfatter(e) (2022). Organelle bottlenecks facilitate evolvability by traversing heteroplasmic fitness valleys . Frontiers in Genetics.
  • Vis forfatter(e) (2022). Organelle bottlenecks facilitate evolvability by traversing heteroplasmic fitness valleys. Frontiers in Genetics.
  • Vis forfatter(e) (2022). Optimal strategies in the Fighting Fantasy gaming system: influencing stochastic dynamics by gambling with limited resource. European Journal of Operational Research. 1272-1281.
  • Vis forfatter(e) (2022). Interdisciplinary and Transferable Concepts in Bioinformatics Education: Observations and Approaches From a UK MSc Course. Frontiers in Education.
  • Vis forfatter(e) (2022). HyperHMM: efficient inference of evolutionary and progressive dynamics on hypercubic transition graphs. Bioinformatics.
  • Vis forfatter(e) (2022). Exchange on dynamic encounter networks allows plant mitochondria to collect complete sets of mitochondrial DNA products despite their incomplete genomes. Quantitative Plant Biology.
  • Vis forfatter(e) (2022). Evolutionary inference across eukaryotes identifies universal features shaping organelle gene retention. Cell Systems. 874-884.e5.
  • Vis forfatter(e) (2022). Dynamic Boolean modelling reveals the influence of energy supply on bacterial efflux pump expression. Journal of the Royal Society Interface. 1-14.
  • Vis forfatter(e) (2022). Altered collective mitochondrial dynamics in the Arabidopsis msh1 mutant compromising organelle DNA maintenance. Journal of Experimental Botany. 5428-5439.
  • Vis forfatter(e) (2021). Understanding learner behaviour in online courses with Bayesian modelling and time series characterisation. Scientific Reports.
  • Vis forfatter(e) (2021). Sexually antagonistic evolution of mitochondrial and nuclear linkage. Journal of Evolutionary Biology. 757-766.
  • Vis forfatter(e) (2021). Network analysis of Arabidopsis mitochondrial dynamics reveals a resolved tradeoff between physical distribution and social connectivity. Cell Systems. 419-431.
  • Vis forfatter(e) (2021). Avoiding organelle mutational meltdown across eukaryotes with or without a germline bottleneck. PLoS Biology.
  • Vis forfatter(e) (2021). 2-Deoxy-D-glucose couples mitochondrial DNA replication with mitochondrial fitness and promotes the selection of wild-type over mutant mitochondrial DNA. Nature Communications.
  • Vis forfatter(e) (2020). S100A4 mRNA-protein relationship uncovered by measurement noise reduction. Journal of Molecular Medicine. 735-749.
  • Vis forfatter(e) (2020). MtDNA sequence features associated with 'selfish genomes' predict tissue-specific segregation and reversion. Nucleic Acids Research (NAR). 8290-8301.
  • Vis forfatter(e) (2020). Efficient vasculature investment in tissues can be determined without global information. Journal of the Royal Society Interface.
  • Vis forfatter(e) (2020). Data-Driven Inference Reveals Distinct and Conserved Dynamic Pathways of Tool Use Emergence across Animal Taxa. iScience.
  • Vis forfatter(e) (2020). Cell identity and nucleo-mitochondrial genetic context modulate OXPHOS performance and determine somatic heteroplasmy dynamics. Science Advances. 1-13.
  • Vis forfatter(e) (2019). Varied mechanisms and models for the varying mitochondrial bottleneck. Frontiers in Cell and Developmental Biology. 1-16.
  • Vis forfatter(e) (2019). Tension and resolution: dynamic, evolving populations of organelle genomes within plant cells. Molecular Plant. 764.
  • Vis forfatter(e) (2019). Precision identification of high-risk phenotypes and progression pathways in severe malaria without requiring longitudinal data. npj Digital Medicine. 1.
  • Vis forfatter(e) (2019). Model selection and parameter estimation for root architecture models using likelihood-free inference. Journal of the Royal Society Interface. 1-10.
  • Vis forfatter(e) (2019). Mitochondrial network state scales mtDNA genetic dynamics. Genetics. 1429-1443.
  • Vis forfatter(e) (2019). Intracellular Energy Variability Modulates Cellular Decision-Making Capacity. Scientific Reports. 1-12.
  • Vis forfatter(e) (2019). HyperTraPS: Inferring probabilistic patterns of trait acquisition in evolutionary and disease progression pathways. Cell Systems. 1.
  • Vis forfatter(e) (2019). Evolving mtDNA populations within cells. Biochemical Society Transactions. 1367.
  • Vis forfatter(e) (2019). Energetic costs of cellular and therapeutic control of stochastic mitochondrial DNA populations. PLoS Computational Biology. e1007023.
  • Vis forfatter(e) (2019). Regulation of Mother-to-Offspring Transmission of mtDNA Heteroplasmy. Cell Metabolism.
  • Vis forfatter(e) (2018). Identification of a bet-hedging network motif generating noise in hormone concentrations and germination propensity in Arabidopsis. Journal of the Royal Society Interface. 20180042.
Brev til redaktøren
  • Vis forfatter(e) (2022). Reply to Ocklenburg and Mundorf: The interplay of developmental bias and natural selection. Proceedings of the National Academy of Sciences of the United States of America.
Poster
  • Vis forfatter(e) (2023). Stochastic and Deterministic Computation in the regulation of Decision – Making Genetic circuits by Energy Availability.
  • Vis forfatter(e) (2023). Population Dynamics in Response to Environmental Stimuli.
Vitenskapelig oversiktsartikkel/review
  • Vis forfatter(e) (2023). Collective mitochondrial dynamics resolve conflicting cellular tensions: From plants to general principles. Seminars in Cell and Developmental Biology. 253-265.
  • Vis forfatter(e) (2021). What is quantitative plant biology? Quantitative Plant Biology.

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