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Odd André Karlsens bilde

Odd André Karlsen

Førsteamanuensis
  • E-postOdd.Karlsen@uib.no
  • Telefon+47 55 58 46 51
  • Besøksadresse
    Thormøhlens gate 53 A/B
  • Postadresse
    Postboks 7803
    5020 Bergen
Vitenskapelig artikkel
  • Vis forfatter(e) 2020. Proteomics and lipidomics analyses reveal modulation of lipid metabolism by perfluoroalkyl substances in liver of Atlantic cod (Gadus morhua). Aquatic Toxicology. 13 sider.
  • Vis forfatter(e) 2020. Molecular and Functional Properties of the Atlantic Cod (Gadus morhua) Aryl Hydrocarbon Receptors Ahr1a and Ahr2a. Environmental Science and Technology. 1033-1044.
  • Vis forfatter(e) 2020. Expression and localization of the aryl hydrocarbon receptors and cytochrome P450 1A during early development of Atlantic cod (Gadus morhua). Aquatic Toxicology. 10 sider.
  • Vis forfatter(e) 2019. Modulation of neuro-dopamine homeostasis in juvenile female Atlantic cod (Gadus morhua) exposed to polycyclic aromatic hydrocarbons and perfluoroalkyl substances. Environmental Science and Technology. 7036-7044.
  • Vis forfatter(e) 2019. Effects of agricultural pesticides in aquafeeds on wild fish feeding on leftover pellets near fish farms. Frontiers in Genetics. 1-18.
  • Vis forfatter(e) 2019. Contaminant accumulation and biological responses in Atlantic cod (Gadus morhua) caged at a capped waste disposal site in Kollevåg, Western Norway. Marine Environmental Research. 39-51.
  • Vis forfatter(e) 2019. Analysis of immunoglobulin and T cell receptor gene expression in ballan wrasse (Labrus bergylta) revealed an extraordinarily high IgM expression in the gut. Fish and Shellfish Immunology. 650-658.
  • Vis forfatter(e) 2018. Sequence variations in pxr (nr1i2) from Zebrafish (Danio rerio) strains affect nuclear receptor function. Toxicological Sciences. 28-39.
  • Vis forfatter(e) 2018. RNA-Seq analysis of transcriptome responses in Atlantic cod (Gadus morhua) precision-cut liver slices exposed to benzo[a]pyrene and 17α-ethynylestradiol. Aquatic Toxicology. 174-186.
  • Vis forfatter(e) 2018. LC-MS/MS based profiling and dynamic modelling of the steroidogenesis pathway in adrenocarcinoma H295R cells. Toxicology in Vitro. 332-341.
  • Vis forfatter(e) 2018. Independent losses of a xenobiotic receptor across teleost evolution. Scientific Reports. 1-13.
  • Vis forfatter(e) 2018. Effects of defined mixtures of POPs and endocrine disruptors on the steroid metabolome of the human H295R adrenocortical cell line. Chemosphere. 328-339.
  • Vis forfatter(e) 2018. Assessing the environmental quality of sediments from Split coastal area (Croatia) with a battery of cell-based bioassays. Science of the Total Environment. 1640-1648.
  • Vis forfatter(e) 2017. Quantitative proteomics analysis reveals perturbation of lipid metabolic pathways in the liver of Atlantic cod (Gadus morhua) treated with PCB 153. Aquatic Toxicology. 19-28.
  • Vis forfatter(e) 2016. Transcriptomic profiling of Methylococcus capsulatus (Bath)during growth with two different methane monooxygenases. MicrobiologyOpen. 254-267.
  • Vis forfatter(e) 2016. Quantitative analyses of the hepatic proteome of methylmercury-exposed Atlantic cod (Gadus morhua) suggest oxidative stress-mediated effects on cellular energy metabolism. BMC Genomics. 1-15.
  • Vis forfatter(e) 2016. Characterization of IgM in Norwegian cleaner fish (lumpfish and wrasses). Fish and Shellfish Immunology. 9-17.
  • Vis forfatter(e) 2016. Assessment of the environmental quality of coastal sediments by using a combination of in vitro bioassays. Marine Pollution Bulletin. 53-61.
  • Vis forfatter(e) 2014. Precision-cut liver slices of Atlantic cod (Gadus morhua): An in vitro system for studying the effects of environmental contaminants. Aquatic Toxicology. 110-115.
  • Vis forfatter(e) 2014. Liver transcriptome analysis of Atlantic cod (Gadus morhua) exposed to PCB 153 indicates effects on cell cycle regulation and lipid metabolism. BMC Genomics.
  • Vis forfatter(e) 2014. CorA is a copper repressible surface-associated copper(I)-binding protein produced in Methylomicrobium album BG8. PLOS ONE.
  • Vis forfatter(e) 2014. Alterations in the atlantic COD (Gadus morhua) hepatic thiol-proteome after methylmercury exposure. Journal of Toxicology and Environmental Health, Part A. 650-662.
  • Vis forfatter(e) 2013. Global transcriptome analysis of Atlantic cod (Gadus morhua) liver after in vivo methylmercury exposure suggests effects on energy metabolism pathways. Aquatic Toxicology. 314-325.
  • Vis forfatter(e) 2012. The Methylococcus capsulatus (Bath) Secreted Protein, MopE*, Binds Both Reduced and Oxidized Copper. PLOS ONE. 10 sider.
  • Vis forfatter(e) 2012. Mass spectrometric analyses of microsomal cytochrome P450 isozymes isolated from beta-naphthoflavone-treated Atlantic cod (Gadus morhua) liver reveal insights into the cod CYPome. Aquatic Toxicology. 2-10.
  • Vis forfatter(e) 2012. Conservation and divergence of chemical defense system in the tunicate Oikopleura dioica revealed by genome wide response to two xenobiotics. BMC Genomics. 17 sider.
  • Vis forfatter(e) 2011. Integrative Environmental Genomics of Cod (Gadus morhua): The Proteomics Approach. Journal of Toxicology and Environmental Health, Part A. 494-507.
  • Vis forfatter(e) 2010. Identification of a bacterial di-haem cytochrome c peroxidase from Methylomicrobium album BG8. Microbiology (Reading). 2682-2690.
  • Vis forfatter(e) 2009. Human Naa50p (Nat5/San) Displays Both Protein N-alpha- and N-epsilon-Acetyltransferase Activity. Journal of Biological Chemistry. 31122-31129.
  • Vis forfatter(e) 2008. The presence of multiple c-type cytochromes at the surface of the methanotrophic bacterium Methylococcus capsulatus (Bath) is regulated by copper. Molecular Microbiology. 15-26.
  • Vis forfatter(e) 2008. An oxidized tryptophan facilitates copper binding in Methylococcus capsulatus-secreted protein MopE. Journal of Biological Chemistry. 13897-13904.
  • Vis forfatter(e) 2006. Analysing the outer membrane subproteome of Methylococcus capsulatus (Bath) using proteomics and novel biocomputing tools. Archives of Microbiology. 362-377.
  • Vis forfatter(e) 2005. Identification of a copper-repressible cytochrome c peroxidase of Methylococcus capsulatus (Bath); a member of a novel group of the bacterial di-heme cytochrome c peroxidase family of proteins. The FEBS Journal. 6324-6335.
  • Vis forfatter(e) 2005. Characterisation of a prokaryotic hemerythrin from the methanotrophic bacterium Methylococcus capsulatus (Bath). The FEBS Journal. 2428-2440.
  • Vis forfatter(e) 2004. The core 2 ß-1,6-N-acetylglucosaminyltransferase-M encoded by bovine herpesvirus 4 is not essential for virus replication despite contributing to post-translational modifications of structural proteins. Journal of General Virology. 355-367.
  • Vis forfatter(e) 2003. The surface-associated and secreted MopE protein of Methylococcus capsulatus (Bath) responds to changes in the concentration of copper in the growth medium. Applied and Environmental Microbiology. 2386-2388.
  • Vis forfatter(e) 2003. Multiple polypeptide forms observed in two-dimensional gels of Methylococcus capsulatus (Bath) polypeptides are generated during the separation procedure. Electrophoresis. 757-761.
Faglig foredrag
  • Vis forfatter(e) 2019. Chemical warfare in the marine environment.
  • Vis forfatter(e) 2018. Characterization of the Atlantic cod (Gadus morhua) Aryl hydrocarbon receptors Ahr1a and Ahr2a.
Vitenskapelig foredrag
  • Vis forfatter(e) 2020. Polar cod and Goliat: How an oil spill may affect polar cod reproduction.
  • Vis forfatter(e) 2020. Adapting a liver slice culture method for ex vivo toxicological studies in arctic and sub-arctic fish species during sampling cruises.
  • Vis forfatter(e) 2020. ANTIESTROGENIC EFFECTS OF BENZO[a]PYRENE REVEALED BY TRANSCRIPTOME ANALYSIS IN POLAR COD LIVER SLICE CULTURE.
  • Vis forfatter(e) 2020. A multi-omics approach to study Ppar-mediated regulation of lipid metabolism in Atlantic cod (Gadus morhua).
  • Vis forfatter(e) 2019. dCOD 1.0: DECODING THE SYSTEMS TOXICOLOGY OF ATLANTIC COD (GADUS MORHUA) – HIGHLIGHTS SO FAR.
  • Vis forfatter(e) 2019. Toxicogenomic responses in Atlantic cod (Gadus morhua) after treatment with selected environmental contaminants in vivo and ex vivo.
  • Vis forfatter(e) 2019. The chemical defensome of Atlantic cod (Gadus morhua).
  • Vis forfatter(e) 2019. In vitro assessment of estrogenic and androgenic effects of bisphenols on Atlantic cod (Gadus morhua).
  • Vis forfatter(e) 2019. Effects of agricultural pesticides in aquafeeds on wild fish feeding on leftover pellets near fish farms. Conference talk.
  • Vis forfatter(e) 2019. EFFECTS OF SELECTED ENVIRONMENTAL ESTROGENS ON EXPRESSION OF FIBROBLAST GROWTH FACTOR SIGNALING PATHWAY GENES IN THE LIVER OF ATLANTIC COD (GADUS MORHUA) IN VIVO AND EX VIVO.
  • Vis forfatter(e) 2019. Contaminant accumulation and biological responses in Atlantic cod (Gadus morhua) exposed to polycyclic aromatic hydrocarbons and perfluoroalkyl substances.
  • Vis forfatter(e) 2019. Biological responses of Atlantic cod (Gadus morhua) exposed to polycyclic aromatic hydrocarbons and perfluoroalkyl substances.
  • Vis forfatter(e) 2019. Assessment of endocrine disrupting effects of bisphenols in Atlantic cod (Gadus morhua) using luciferase reporter assays and precision-cut liver slices.
  • Vis forfatter(e) 2019. Agricultural pesticides in aquafeeds might harm wild fish feeding on leftover pellets near fish farms.
  • Vis forfatter(e) 2018. dCOD 1.0: DECODING THE SYSTEMS TOXICOLOGY OF ATLANTIC COD (GADUS MORHUA).
  • Vis forfatter(e) 2018. The nuclear receptor complement of Atlantic cod (Gadus morhua) as potential targets for endocrine disrupting compounds.
  • Vis forfatter(e) 2018. RNA-seq analysis of transcriptome responses in Atlantic cod (Gadus morhua) precision cut liver slices exposed to benzo[a]pyrene and 17α-ethynylestradiol.
  • Vis forfatter(e) 2018. RNA-seq analysis of transcriptome responses in Atlantic cod (Gadus morhua) precision cut liver slices exposed to benzo[a]pyrene and 17α-ethynylestradiol.
  • Vis forfatter(e) 2018. Modelling the chemical defensome networks --- a dynamic visualisation of the involved genes and interactions in two fish species and human.
  • Vis forfatter(e) 2018. Modelling the chemical defensome network - a dynamic visualisation of the involved genes and pathways in two fish species and humans .
  • Vis forfatter(e) 2018. Modelling The Chemical Defensome Networks - A Comparative Dynamic Visualisation Of The Involved Genes And Interactions In Two Fish Species And Humans.
  • Vis forfatter(e) 2018. Establishing a cellfree method for xenobiotic detection using ligand activated receptors from the Atlantic cod, Gadus morhua.
  • Vis forfatter(e) 2018. Ecotoxicological responses in Atlantic cod (Gadus morhua) after caging at a capped waste disposal site in Kollevåg, Western Norway .
  • Vis forfatter(e) 2018. Ecotoxicological responses in Atlantic cod (Gadus morhua) after caging at a capped waste disposal site in Kollevåg, Western Norway .
  • Vis forfatter(e) 2018. Characterization of the aryl hydrocarbon receptors Ahr1a and Ahr2a in Atlantic cod (Gadus morhua).
  • Vis forfatter(e) 2018. Characterization of the aryl hydrocarbon receptors Ahr1a and Ahr2a in Atlantic cod (Gadus morhua).
  • Vis forfatter(e) 2018. Characterization of the Atlantic cod (Gadus morhua) Aryl hydrocarbon receptors Ahr1a and Ahr2a.
  • Vis forfatter(e) 2018. Characterization of the Atlantic cod (Gadus morhua) Aryl hydrocarbon receptors Ahr1a and Ahr2a.
  • Vis forfatter(e) 2018. Agonistic and antagonistic effects of perfluorinated compounds on Atlantic cod (Gadus morhua) PPARαa and PPARαb nuclear receptors.
  • Vis forfatter(e) 2017. PRECISION-CUT LIVER SLICES (PCLS) FOR TOXICOGENOMIC STUDIES IN ATLANTIC COD (Gadus morhua): THE dCOD 1.0 PROJECT.
  • Vis forfatter(e) 2017. Integrative transcriptome and proteome analysis reveals perturbation of lipid metabolic pathways in the liver of Atlantic cod (Gadus morhua) treated with PCB 153.
  • Vis forfatter(e) 2017. Ecotoxicological responses in Atlantic cod (Gadus morhua) after caging at a capped waste disposal site in Kollevåg, Western Norway .
  • Vis forfatter(e) 2017. CHARACTERIZATION OF THE ARYL HYDROCARBON RECEPTORS AHR1B AND AHR2 IN ATLANTIC COD (GADUS MORHUA).
  • Vis forfatter(e) 2016. Toxicogenomics as a tool for understanding responses to pollutants in organisms: Using Atlantic cod (Gadus morhua) and a systems biology approach to environmental toxicology.
  • Vis forfatter(e) 2016. Integrative -omics analyses reveal perturbation of lipid metabolic pathways in the liver of Atlantic cod (Gadus morhua) exposed to the persistent organic pollutant PCB 153.
  • Vis forfatter(e) 2016. Chemical warfare in the marine environment: genomic survey of the Atlantic cod (Gadus morhua) defensome reveals the absence of an important xenosensor.
  • Vis forfatter(e) 2014. ALTERATIONS IN THE HEPATIC PROTEOME OF POLAR COD (BOREOGADUS SAIDA) AFTER DIETARY EXPOSURE TO BENZO[A]PYRENE.
  • Vis forfatter(e) 2011. Genome-wide gene expression and proteome analysis of cod (Gadus morhua) liver after treatment with methylmecury and PCB153.
  • Vis forfatter(e) 2003. The expression of the surface associated MopE protein of Methylococcus capsulatus (Bath) is regulated by the concentration of copper in the growth medium.
  • Vis forfatter(e) 2003. Proteome studies on the methanotrophic bacterium Methylococcus capsulatus (Bath).
  • Vis forfatter(e) 2003. Multiple polypeptide forms observed in twodimensional gels of Methylococcus capsulatus (Bath)polypeptides are generated during the separation procedure.
  • Vis forfatter(e) 2002. Initial proteome studies of Methylococcus capsulatus (Bath).
Hovedfagsoppgave
  • Vis forfatter(e) 2005. A study of McHr – a novel prokaryotic hemerythrin from Methylococcus capsulatus (Bath).
  • Vis forfatter(e) 2004. Studies of Methylococcus capsulatus (Bath): The surface associated protein SapE.
  • Vis forfatter(e) 2001. The proteome of Methylococcus capsulatus; An initial study by two-domentional gel electrophoresis.
Kronikk
  • Vis forfatter(e) 2018. Torsken manglar eit viktig gen i forsvaret mot miljøgifter. Forskning.no.
Doktorgradsavhandling
  • Vis forfatter(e) 2019. Molecular characterization of key components of the adaptive immune system in ballan wrasse (Labrus bergylta).
  • Vis forfatter(e) 2005. Molecular analyses of copper responding proteins in Methylococcus capsulatus (Bath).
Sammendrag/abstract
  • Vis forfatter(e) 2012. Integrative environmental genomics of cod (Gadus morhua) reveal the mechanisms underlying MeHg- and PCB153 induced toxicity. Comparative Biochemistry and Physiology A. S49-S49.
  • Vis forfatter(e) 2010. iCod: Integrative environmental genomics of cod (Gadus morhua); the proteomics approach. Comparative Biochemistry and Physiology A. S44-S44.
  • Vis forfatter(e) 2010. The chaperone-like protein HYPK acts together with NatA in cotranslational N-terminal acetylation and prevention of Huntingtin aggregation. The FEBS Journal. 185-185.
  • Vis forfatter(e) 2010. Human Naa50p (Nat5/San) displays both protein N-alpha- and N-epsilon-Acetyltransferase activity. The FEBS Journal. 182-182.
Poster
  • Vis forfatter(e) 2019. dCOD 1.0: DECODING THE SYSTEMS TOXICOLOGY OF ATLANTIC COD (GADUS MORHUA) – HIGHLIGHTS SO FAR.
  • Vis forfatter(e) 2019. THE CHEMICAL DEFENSOME OF ATLANTIC COD (GADUS MORHUA): HOW DOES IT DIFFER FROM DEFENSOME NETWORKS IN OTHER TELEOST SPECIES?
  • Vis forfatter(e) 2019. Polycyclic aromatic hydrocarbons potentiate vitamin D receptor (Vdr) activation by calcitriol in Atlantic cod (Gadus morhua).
  • Vis forfatter(e) 2019. In vitro assessment of estrogenic effects of bisphenols on Atlantic cod (Gadus morhua).
  • Vis forfatter(e) 2019. Evaluation of estrogenic effects of bisphenols using luciferase reporter assay and Atlantic cod (Gadus morhua) liver slice culture.
  • Vis forfatter(e) 2019. Chemical warfare in the aquatic environment - The chemical defensome networks of model fish species.
  • Vis forfatter(e) 2019. Biological responses of Atlantic cod (Gadus morhua) exposed to polycyclic aromatic hydrocarbons (PAHs) and perfluoroalkyl substances (PFASs) .
  • Vis forfatter(e) 2019. Assessment of produced water toxicity using in vitro tools developed from Atlantic cod (Gadus morhua).
  • Vis forfatter(e) 2018. PW-Exposed: Produced water fractionation and advanced chemical and toxicological characterization using sensitive life stages of marine fish species.
  • Vis forfatter(e) 2018. MODELLING THE CHEMICAL DEFENSOME NETWORKS - a comparative visualisation of the defense genes and interactions in two fish species and human.
  • Vis forfatter(e) 2018. Establishing a cell-free method for xenobiotic detection using ligand activated receptors from the Atlantic cod (Gadus morhua).
  • Vis forfatter(e) 2018. Effects of perfluorinated compounds on Atlantic cod (Gadus morhua) PPARαa and PPARαb nuclear receptors.
  • Vis forfatter(e) 2017. dCod 1.0: decoding the systems toxicology of Atlantic cod (Gadus morhua).
  • Vis forfatter(e) 2017. dCod 1.0: decoding the systems toxicology of Atlantic cod (Gadus morhua) - WP8: biomarkers and xenosensors.
  • Vis forfatter(e) 2017. dCod 1.0: decoding the systems toxicology of Atlantic cod (Gadus morhua) - WP8: biomarkers and xenosensors.
  • Vis forfatter(e) 2017. dCod 1.0 decoding the systems toxicology of Atlantic cod.
  • Vis forfatter(e) 2017. Using precision-cut liver slices (PCLS) and luciferase reporter gene assays to characterise the aryl hydrocarbon receptors (Ahr) in Atlantic cod (Gadus morhua).
  • Vis forfatter(e) 2017. Using precision-cut liver slices (PCLS) and luciferase reporter gene assays to characterise the aryl hydrocarbon receptors (Ahr) in Atlantic cod (Gadus morhua).
  • Vis forfatter(e) 2017. Using precision-cut liver slices (PCLS) and luciferase reporter gene assays to characterise the aryl hydrocarbon receptors (Ahr) in Atlantic cod (Gadus morhua).
  • Vis forfatter(e) 2017. Using precision cut liver slices (PCLS) for studying effects of environmental contaminants on the Atlantic cod (Gadus morhua) lipid metabolism.
  • Vis forfatter(e) 2017. Studying estrogenic effects of environmental pollutants by using the Atlantic cod (Gadus morhua) estrogen receptor α and a reporter gene assay.
  • Vis forfatter(e) 2017. Peroxisome proliferator-activated receptors (PPARs) as tools for studying effects of contaminants on the Atlantic cod (Gadus morhua) lipid metabolism.
  • Vis forfatter(e) 2017. Establishing a cell-free method for xenobiotic detection using ligand activated receptors from the Atlantic cod (Gadus morhua).
  • Vis forfatter(e) 2017. Ecotoxicological responses in Atlantic cod (Gadus morhua) following caging near a previously capped waste disposal site in Kollevågen, Askøy, Norway .
  • Vis forfatter(e) 2017. Ecotoxicological responses in Atlantic cod (Gadus morhua) following caging near a previously capped waste disposal site in Kollevågen, Askøy, Norway .
  • Vis forfatter(e) 2017. Ecotoxicological responses in Atlantic cod (Gadus morhua) following caging near a previously capped waste disposal site in Kollevågen, Askøy, Norway .
  • Vis forfatter(e) 2016. Using precision-cut liver slices (PCLS) and luciferase reporter gene assay to characterize the aryl hydrocarbon receptors (Ahr) in Atlantic cod (Gadus morhua).
  • Vis forfatter(e) 2016. Systems Toxicology Studies to Investigate Mechanisms of Toxicity of Environmental Chemicals Using Atlantic cod (Gadus morhua) as a Model Organism.
  • Vis forfatter(e) 2016. Peroxisome proliferator-activated receptors (PPARs) as tools to study effects of contaminants on the Atlantic cod (Gadus morhua) lipid metabolism.
  • Vis forfatter(e) 2016. Integrated analysis of transcriptome and proteome reveals perturbation of lipid metabolic pathways in the liver of Atlantic cod (Gadus morhua) treated with the persistent organic pollutant PCB 153 .
  • Vis forfatter(e) 2016. Effektar på lipidmetabolismen til atlanterhavstorsk (Gadus morhua) etter eksponering mot enkeltsambindingar og blandingar av miljøgiftar.
  • Vis forfatter(e) 2014. Alterations in the hepatic proteome of polar cod (Boreogadus saida) after dietary exposure to benzo(a)pyrene .
  • Vis forfatter(e) 2012. Integrative environmental genomics of Atlantic cod (Gadus morhua): exposure of cod liver slices to environmental contaminants.
  • Vis forfatter(e) 2010. Human Naa50p (Nat5/San) Displays Both Protein Na-and Ne-Acetyltransferase activity.
  • Vis forfatter(e) 2004. Surface proteins of M. capsulatus (Bath) possibly involved in copper uptake.
  • Vis forfatter(e) 2004. Copper-regulation of some surface-exposed and secreted proteins of the methane-oxidizing bacterium Methylococcus capsulatus (Bath).
  • Vis forfatter(e) 2004. Copper homeostasis in Methylococcus capsulatus.
  • Vis forfatter(e) 2004. An introduction to copper homeostasis in Methylococcus capsulatus.
  • Vis forfatter(e) 2003. Identification of the ORF upstream of MopE in Methylococcus capsulatus.
  • Vis forfatter(e) 2003. Differential expression in sMMO and pMMO producing cells of Methylococcus capsulatus (Bath).
  • Vis forfatter(e) 2002. Initial proteome studies on Methylococcus capsulatus (Bath).
  • Vis forfatter(e) 2002. Characterization of copper-repressible extracellular protein of Methylococcus capsulatus (Bath).
Vitenskapelig oversiktsartikkel/review
  • Vis forfatter(e) 2011. The copper responding surfaceome of Methylococccus capsulatus Bath. FEMS Microbiology Letters. 97-104.
  • Vis forfatter(e) 2011. Methylococcus capsulatus (Bath): From Genome to Protein Function, and Vice Versa. Methods in Enzymology. 63-79.
  • Vis forfatter(e) 2011. METHANOTROPH OUTER MEMBRANE PREPARATION. Methods in Enzymology. 167-176.

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